VIMSS3375468 has 172 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-60 188.8 12.8 4.1e-60 188.7 12.8 1.0 1 VIMSS3375468
Domain annotation for each sequence (and alignments):
>> VIMSS3375468
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 188.7 12.8 4.1e-60 4.1e-60 1 160 [. 11 168 .. 11 169 .. 0.98
Alignments for each domain:
== domain 1 score: 188.7 bits; conditional E-value: 4.1e-60
Cas_Cas4 1 tgvkinyyliCkrklwlfsheitmeeeselvelGkliheesykr.ekkeveisesikiDvvkkekeklvvvevKkskkieeaaklQllyYlllLe.k 95
+gvkinyy++Ckrklwlfs++itme++s++v Gk++he+sykr ++ke+ i++ +k+D++k + +v evK s+k++ea+++Ql+yYl++L+ +
VIMSS3375468 11 QGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRmKNKEILIDDILKLDIIK----DEYVKEVKISSKMKEADEMQLYYYLYYLKnS 103
599*****************************************666***************....99***************************9* PP
Cas_Cas4 96 kgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
+gie+kG+++y+kekk+ee+ ltee+++ +e+++ +i+ei ++ +pp+ +kk++C+kCay+e+C+
VIMSS3375468 104 MGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCF 168
****************************************************************9 PP
Or compare VIMSS3375468 to CDD or PaperBLAST