VIMSS3384747 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.6e-278 908.0 3.3 1.1e-277 907.8 3.3 1.0 1 VIMSS3384747
Domain annotation for each sequence (and alignments):
>> VIMSS3384747
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 907.8 3.3 1.1e-277 1.1e-277 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 907.8 bits; conditional E-value: 1.1e-277
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++atG++d+d++kPiiavvns+t++vPghvhl+dl+klv+e+ieaaGgvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++D
VIMSS3384747 18 ARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCAD 114
79*********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
a+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls+ki+++d+++a+++ a++k+s+e+++++ersacPt+gsCsG+ftansm+clteal
VIMSS3384747 115 AMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDKIIKLDLVDAMIQGADPKVSDEQSNQVERSACPTCGSCSGMFTANSMNCLTEAL 211
************************************************************************************************* PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
Gls+Pg+++llat+a++kel+ ++gkrivel+k++++ Pr+i++k+afena+tld+a+GGstntvLhlla+a+ea+++++++d+d+lsrkv
VIMSS3384747 212 GLSQPGNGSLLATHADRKELFLNAGKRIVELTKRYYEqddasalPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKV 308
************************************************************************************************* PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...............................vdqd.. 348
P+l+k++Ps++k+ +ed+hraGGv ++l+eld++gll++++++v+G tl +tle+++v+ +d+d
VIMSS3384747 309 PQLCKVAPSTQKYhMEDVHRAGGVLGILGELDRAGLLNREVKNVLGLTLPQTLEQYDVMVtqddavkkmfragpagirttqafsqdcrwdtLDDDra 405
************99*********************************************99*****************************9444455 PP
TIGR00110 349 ..virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvgl 443
+irsl+++++k+gglavL+Gn+ae+G++vk+agv+++ilkf+Gpakv+es+++a+eailggkv eGdvvviryeGPkGgPGm+emL+Pts+l+++
VIMSS3384747 406 egCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVEGDVVVIRYEGPKGGPGMQEMLYPTSFLKSM 502
66*********************************************************************************************** PP
TIGR00110 444 GLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyakl 531
GLgk++aLitDGrfsGgt+GlsiGhvsPeaa+gG+ial+edGD+i+iDi+nr ++l++s++e+a+rr++++++++ r+v++aL++ya+l
VIMSS3384747 503 GLGKACALITDGRFSGGTSGLSIGHVSPEAASGGNIALIEDGDMIAIDIPNRSIQLQLSDAEIAARREAQEARGDqawtpknrqRQVSFALRAYASL 599
************************************************************************999999*****9************* PP
TIGR00110 532 vssadkGavld 542
++sadkGav+d
VIMSS3384747 600 ATSADKGAVRD 610
*********98 PP
Or compare VIMSS3384747 to CDD or PaperBLAST