VIMSS33897 has 1192 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.2e-36 110.8 0.0 7.6e-36 110.0 0.0 1.4 1 VIMSS33897
Domain annotation for each sequence (and alignments):
>> VIMSS33897
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.0 0.0 7.6e-36 7.6e-36 48 257 .. 978 1192 .] 974 1192 .] 0.85
Alignments for each domain:
== domain 1 score: 110.0 bits; conditional E-value: 7.6e-36
Met_synt_B12 48 Lkkiieekl.lkakavvglfpAnsegddievyades.rseelatlhtLrqqaekeegkpnlclaDfvapk....esgvkDyiGlFavtaglgiee 136
L+++ ++ +a v+g fpA seg+di+v ++ + ++ + ++h+ rqq+ lc+aDf++++ e+g+ D++ + vt+g+ i +
VIMSS33897 978 LDRLSTDGIlAHAAVVYGYFPAVSEGNDIVVLTEPKpDAPVRYRFHFPRQQRG-----RFLCIADFIRSRelaaERGEVDVLPFQLVTMGQPIAD 1067
56666554404677889**************9888834557788*******54.....59*******987444478999**************** PP
Met_synt_B12 137 lakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakdeklsn......eelikekYqgiRpApGYpacpdhtekktlfelldaee 224
+a+e+ a+ + Y++ + v+ + +L+eA+ae+ h+++r+el +++ d ++ e+ +k Y+g R A+GY acpd + +++++ ll+ e+
VIMSS33897 1068 FANELFAS-NAYRDyLEVHGIGVQLTEALAEYWHRRIREEL-KFSGDRAMAAedpeakEDYFKLGYRGARFAFGYGACPDLEDRAKMMALLEPER 1160
****9888.56665156899******************996.5666655554222223889999******************************9 PP
Met_synt_B12 225 kigieLteslamtPaasvsGlyfahpearyFav 257
ig++L+e+l ++P++s ++++ hpea+yF+v
VIMSS33897 1161 -IGVTLSEELQLHPEQSTDAFVLHHPEAKYFNV 1192
.******************************97 PP
Or compare VIMSS33897 to CDD or PaperBLAST