VIMSS340840 has 147 amino acids
Query: DUF188 [M=130]
Accession: PF02639.18
Description: Uncharacterized BCR, YaiI/YqxD family COG1671
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.8e-51 157.5 0.0 7.8e-51 157.4 0.0 1.0 1 VIMSS340840
Domain annotation for each sequence (and alignments):
>> VIMSS340840
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 157.4 0.0 7.8e-51 7.8e-51 2 130 .] 18 146 .. 17 146 .. 0.99
Alignments for each domain:
== domain 1 score: 157.4 bits; conditional E-value: 7.8e-51
DUF188 2 vlrvaerlklevilvankslrlpsselvelvvVdagadaaDdkIveraekgDlvvTqDipLAarvlekgakvlnprGelyteenIdellaeRdlmekl 99
++r+aer+++e+++van+ + +p+++++++++V+ag+d aD++Iv+r+e++Dlv+T+DipLA++v++kga +l+ rGelyt+++I+++l+ Rd+me++
VIMSS340840 18 IVRAAERTGVECTFVANHVVPVPKRANIHSLQVPAGFDIADNEIVRRVEPNDLVITSDIPLADEVITKGALALSSRGELYTKDTIKARLNIRDFMETM 115
89************************************************************************************************ PP
DUF188 100 RragkktkgpkkfskedrsrFanaLdrllak 130
R++g +t+gp+++s+++r++Fan+Ldr+lak
VIMSS340840 116 RSSGIQTGGPAALSQTERREFANHLDRILAK 146
****************************975 PP
Or compare VIMSS340840 to CDD or PaperBLAST