VIMSS3494896 has 178 amino acids
Query: Cas_Cas4 [M=160]
Accession: PF01930.23
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.5e-21 60.7 2.0 1.8e-20 59.8 2.0 1.4 1 VIMSS3494896
Domain annotation for each sequence (and alignments):
>> VIMSS3494896
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 59.8 2.0 1.8e-20 1.8e-20 4 159 .. 22 176 .. 19 177 .. 0.80
Alignments for each domain:
== domain 1 score: 59.8 bits; conditional E-value: 1.8e-20
Cas_Cas4 4 einyylvCkrklwlfsr...gitmeeeselvelGkliheesykrek........kevele..kikiDvvkkekeklvvvevKkskkieeaaklQlly 87
in y +C+r lw +r ++ +++ ++ Gkl+he++++ +ve++ + +Dvv k+++ +ve+K + + +ea+k Ql+
VIMSS3494896 22 VINDYEYCPRLLWVQHRlglKLFTKDSAVAIVKGKLLHERYERAVAvydnviveYKVEIDnlVGVVDVVIKRGGVYLPVEIKTGVASREAHKKQLQI 118
699************999444555566666667*****9554442244345555667775567899**999************************** PP
Cas_Cas4 88 YlllLekkgieak.GvleypeekkreeveldeedreeleevikeieeiissekppeaekkkiCkkCayaelCv 159
Y+ lL+ k G+l y k e+ve +++ +v++ei+++++ +kpp++e C+kC ++ +C
VIMSS3494896 119 YIHLLKA-----KyGYLVYRD--KVEKVER----DDSALQVLSEIKKVLTADKPPSVE----CRKCPFKPICR 176
*****84.....449999965..5566665....4567899**************996....*********95 PP
Or compare VIMSS3494896 to CDD or PaperBLAST