VIMSS349870 has 257 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-21 63.5 0.1 3.5e-20 58.6 0.1 2.3 1 VIMSS349870
Domain annotation for each sequence (and alignments):
>> VIMSS349870
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 58.6 0.1 3.5e-20 3.5e-20 102 273 .] 100 256 .. 30 256 .. 0.80
Alignments for each domain:
== domain 1 score: 58.6 bits; conditional E-value: 3.5e-20
Met_synt_B12 102 gkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaek........ddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190
+++ +++ +a + +g ++ + +Fa tag++ e + +++++e+ d+ +i++++ ad++ A+ae+++ ++ W++
VIMSS349870 100 KSTVFSVGKTIARQLRG-SEAFVFFAATAGTEFEVFQHTLQQEEdmvkiyiaDSLGSIIAEKTADCMEVALAEYIR----EKNWKH----------- 180
44556666777777666.467789**********999999999833333333455555555555555555555543....466766........... PP
Met_synt_B12 191 ikekYqgiRpApGYpacpdh.tekktlfelldaeekigieLteslamtPaasvsGlyfahpear..yFavgkiekdqvedyakrkg 273
+ R++pGY c +h +e+++lf l+ +++ +gi+Lt+s m+P +svsG++ + ++ r +++g ++ +++ y krk+
VIMSS349870 181 ------TNRYSPGY--CGWHvSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRklEYTCGLCTYENC--YRKRKH 256
......57******..999989*************************************9999977899******999..999985 PP
Or compare VIMSS349870 to CDD or PaperBLAST