VIMSS3511720 has 539 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-78 248.7 0.2 4e-78 248.1 0.2 1.3 1 VIMSS3511720
Domain annotation for each sequence (and alignments):
>> VIMSS3511720
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 248.1 0.2 4e-78 4e-78 1 252 [. 289 537 .. 289 539 .] 0.91
Alignments for each domain:
== domain 1 score: 248.1 bits; conditional E-value: 4e-78
RACo_C_ter 1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgk 97
e+++l+DiGTN+Ei+l++ ++llaasa+aGPAlEGg+i++Gm A++gAi++v+id + v+ vig+++p+GicGsG++d++ae+l+ gi++++g+
VIMSS3511720 289 ETQMLVDIGTNGEIILQSGEQLLAASAPAGPALEGGNIHHGMIASSGAIDKVNIDFD---VQAAVIGGSNPQGICGSGLVDALAEMLRLGILHSTGR 382
6789**************************************************976...59*********************************** PP
RACo_C_ter 98 lnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAitiGllPdlel 194
+++ + + + + + ++++ +++ +++ it++Di+e++ akaAi ag++++l+e+g++ e+id+v laG+fG+y+++++A +iGll +l+l
VIMSS3511720 383 MREPSELSPVISFRIKQRIKKEPESCFFLAERVAITQQDIREVQLAKAAIAAGIEVVLKEAGIAPEKIDSVQLAGGFGNYLNAANAKRIGLLGRLPL 479
*8876544444433333333333333334669***************************************************************** PP
RACo_C_ter 195 ekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalflpht 252
+kv+qvGN+++agA +lls +ar+e+e ++r+ +++ela++ ++++ f++ + +p++
VIMSS3511720 480 SKVRQVGNAAGAGAISILLSYKARKEAEYLQRSFKHLELASDVRYQRLFLEHINFPDK 537
*******************************************************986 PP
Or compare VIMSS3511720 to CDD or PaperBLAST