VIMSS351688 has 561 amino acids
Query: DUF6377 [M=247]
Accession: PF19904.3
Description: Domain of unknown function (DUF6377)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-84 268.0 18.4 4.4e-84 268.0 18.4 2.7 3 VIMSS351688
Domain annotation for each sequence (and alignments):
>> VIMSS351688
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 2.0 0.3 0.0071 0.0071 20 58 .. 97 135 .. 87 144 .. 0.87
2 ? -2.4 0.2 0.16 0.16 11 33 .. 195 217 .. 166 266 .. 0.67
3 ! 268.0 18.4 4.4e-84 4.4e-84 1 247 [] 272 526 .. 272 526 .. 0.98
Alignments for each domain:
== domain 1 score: 2.0 bits; conditional E-value: 0.0071
DUF6377 20 yeegdierAykYikvaledakfynarlRkleiseilpiI 58
y++ +i+ A +Y++ le a++ n ++ k++ s l+++
VIMSS351688 97 YKKFNIDSAIHYVDRNLEIARQLNRNYLKYQSSLQLSLV 135
78899*******************999999988777766 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.16
DUF6377 11 alqeLaellyeegdierAykYik 33
+l+ L ++ + +++rAy+Y
VIMSS351688 195 SLYALMDHTSFDYKLSRAYSYAG 217
45555555555555555555554 PP
== domain 3 score: 268.0 bits; conditional E-value: 4.4e-84
DUF6377 1 DiksatkenaalqeLaellyeegdierAykYikvaledakfynarlRkleiseilpiIekayqekeekqkrkllillilislllllllvllviiyrql 98
Di++at+e+a+lq La + yee+++ +A+k+ + a++d + ++ ++R++ei ++++iI++ayq++e+++k++l+++li +s+ l+ll+vl+v+iy q+
VIMSS351688 272 DIQNATRETASLQALALIQYEENNLADAFKFTQSAIDDVVSSGIHFRAMEIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIVLVVFIYIQM 369
9************************************************************************************************* PP
DUF6377 99 kklkkarkelkeaneqlkelnee........neqnekLseankikeeyigrflnlcseyidklekyrksverklkakqldellkllkssklieeelee 188
kk+ +++++l+++ne+l +ln++ n++n++L e n+ike+yi++f+++c +yi+k+eky++++++ + +k ++el k+lkss li++el++
VIMSS351688 370 KKTLRMKRALAQSNEELLRLNDKlnsmnselNDKNDELCEINNIKEHYIAQFFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDA 467
*************999999999998875555555**************************************************************** PP
DUF6377 189 lyknFDkaFLklfPdFveefNaLLkeeeqielkkgelLnteLRIfALiRLGitdsekIA 247
ly++FD++FL+l+P+Fv++fNaLLk++e+i lk++ lLn eLRI+AL+RLGitds kIA
VIMSS351688 468 LYTRFDRVFLNLYPTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIA 526
**********************************************************9 PP
Or compare VIMSS351688 to CDD or PaperBLAST