VIMSS352856 has 645 amino acids
Query: DUF4988 [M=182]
Accession: PF16378.9
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-63 199.4 3.3 2e-63 199.4 3.3 3.7 5 VIMSS352856
Domain annotation for each sequence (and alignments):
>> VIMSS352856
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 199.4 3.3 2e-63 2e-63 1 182 [] 25 207 .. 25 207 .. 0.95
2 ! 4.3 0.3 0.0015 0.0015 121 150 .. 224 251 .. 216 274 .. 0.76
3 ? -1.9 0.0 0.12 0.12 54 78 .. 286 310 .. 266 344 .. 0.59
4 ? -1.6 0.0 0.095 0.095 141 155 .. 446 460 .. 415 484 .. 0.64
5 ? -2.6 0.1 0.19 0.19 21 50 .. 514 542 .. 510 555 .. 0.75
Alignments for each domain:
== domain 1 score: 199.4 bits; conditional E-value: 2e-63
DUF4988 1 ledrvdslkervealesqvkelndnitalkalveegkviteveeaadgsyvltlsdgktitlkqgkdgekaaPvigvrdeeGlyyWtvttdGettelk 98
l+d+vd+lk+rve+le+qv+ lndn+ta+k+l+e+g++itev++ +dg+y+l+ls+g+ti+l+qg++ge+a+P+i+v ++eG +W+v +Ge+
VIMSS352856 25 LRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGGQTITEVTN-TDGTYKLKLSNGETISLTQGSKGEVAYPEITV-NDEG--QWVV--NGEVL--- 113
79******************************************.********************************.9***..****..99985... PP
DUF4988 99 daegkkikav...gkdgitPvlsvdee.gyWtvsydeGksverildedGkpvkAvdkds...aedsffksvvad..eeslvltLkngee.lsip 182
++g +++av gkdgi+P++++++e ++W+vsyd+G+s+e++ld+dG++v+Av++ s ++dsff++v++d +e +v++Lk ++e +sip
VIMSS352856 114 MQNGIPVQAVgtpGKDGIAPKFRITDEgSFWQVSYDNGTSWEDVLDTDGQKVSAVSDGSggsSADSFFEEVYVDstGEFFVVKLKGQTEaISIP 207
279999999977789*********99978**************************99988999***********99999*******99878887 PP
== domain 2 score: 4.3 bits; conditional E-value: 0.0015
DUF4988 121 eegyWtvsydeGksverildedGkpvkAvd 150
++gyW++ Gk+ + ++++G+++ +
VIMSS352856 224 KNGYWEI--GYGKTATTTVKVKGENIIVTA 251
58*****..668888899999999986655 PP
== domain 3 score: -1.9 bits; conditional E-value: 0.12
DUF4988 54 lsdgktitlkqgkdgekaaPvigvr 78
+g+ +t++ k a+ i v+
VIMSS352856 286 ADNGSDVTVQVNKGASWAVAKIQVK 310
4455555555555555555555554 PP
== domain 4 score: -1.6 bits; conditional E-value: 0.095
DUF4988 141 edGkpvkAvdkdsae 155
+Gkpv+A +d +
VIMSS352856 446 LNGKPVSAITNDKRS 460
579999998877622 PP
== domain 5 score: -2.6 bits; conditional E-value: 0.19
DUF4988 21 elndnitalkalveegkviteveeaadgsy 50
n+++ + l+ e+++ + e+++ g y
VIMSS352856 514 LFNGSASGIASLTIENNTFINLETNTGG-Y 542
6788888999999788888888886766.5 PP
Or compare VIMSS352856 to CDD or PaperBLAST