VIMSS352856 has 645 amino acids
Query: DUF4988 [M=183]
Accession: PF16378.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-74 233.4 4.9 8.6e-74 233.4 4.9 3.9 4 VIMSS352856
Domain annotation for each sequence (and alignments):
>> VIMSS352856
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 233.4 4.9 8.6e-74 8.6e-74 1 183 [] 25 207 .. 25 207 .. 0.97
2 ! 2.0 0.1 0.0089 0.0089 118 142 .. 224 245 .. 215 269 .. 0.68
3 ? 0.1 0.2 0.033 0.033 50 90 .. 282 324 .. 256 355 .. 0.71
4 ? 0.3 0.0 0.03 0.03 119 153 .. 431 460 .. 364 490 .. 0.71
Alignments for each domain:
== domain 1 score: 233.4 bits; conditional E-value: 8.6e-74
DUF4988 1 lrdevenLkdrvesleeqvkalntsitalkalveegkvitnvteaaDGsytltlsdGstitlknGkdggkdaPvigvkdteGvyyWvvnGeteflkdd 98
lrd+v+nLkdrvesle+qv++ln+++ta+k+l+e+g++it+vt+ +DG+y+l+ls+G+ti+l++G++g++++P+i+v ++eG +WvvnGe+ +
VIMSS352856 25 LRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGGQTITEVTN-TDGTYKLKLSNGETISLTQGSKGEVAYPEITV-NDEG--QWVVNGEVL---MQ 115
79******************************************.********************************.99**..*******95...49 PP
DUF4988 99 ngnkikvs...GkdgitPvlkvdse.gyWevsydkGtsvekildedGkkvkavgkdgkgedaDsffksvvvd..eekvvltLkdgte.ivlp 183
ng++++++ Gkdgi+P++++++e ++W+vsyd+Gts+e++ld+dG+kv+av+++++g++aDsff++v+vd +e++v++Lk++te i++p
VIMSS352856 116 NGIPVQAVgtpGKDGIAPKFRITDEgSFWQVSYDNGTSWEDVLDTDGQKVSAVSDGSGGSSADSFFEEVYVDstGEFFVVKLKGQTEaISIP 207
*******988889************99********************************************9889***********999987 PP
== domain 2 score: 2.0 bits; conditional E-value: 0.0089
DUF4988 118 dsegyWevsydkGts.vekildedGk 142
+ +gyWe+ y k + + k+ +G+
VIMSS352856 224 K-NGYWEIGYGKTATtTVKV---KGE 245
3.8*****886644303344...444 PP
== domain 3 score: 0.1 bits; conditional E-value: 0.033
DUF4988 50 ytltlsdGstitlknGkdggkdaPvigvk..dteGvyyWvvnG 90
t ++Gs +t++ k + +i+vk + yy n
VIMSS352856 282 TRATADNGSDVTVQVNKGASWAVAKIQVKaiQVVDSYYALYNS 324
4567789999999988888888899998843333345555543 PP
== domain 4 score: 0.3 bits; conditional E-value: 0.03
DUF4988 119 segyWevsydkGtsvekildedGkkvkavgkdgkg 153
+e++ +v++d+ + + +Gk+v+a ++d +
VIMSS352856 431 DESFANVAFDQCQ---IV--LNGKPVSAITNDKRS 460
4688888777543...33..579999999999833 PP
Or compare VIMSS352856 to CDD or PaperBLAST