PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS353008 to PF08760 (DUF1793)

VIMSS353008 has 174 amino acids

Query:       DUF1793  [M=169]
Accession:   PF08760.15
Description: Domain of unknown function (DUF1793)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-67  212.7   3.1    2.7e-67  212.5   3.1    1.0  1  VIMSS353008  


Domain annotation for each sequence (and alignments):
>> VIMSS353008  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.5   3.1   2.7e-67   2.7e-67       1     168 [.       1     165 [.       1     166 [. 0.98

  Alignments for each domain:
  == domain 1  score: 212.5 bits;  conditional E-value: 2.7e-67
      DUF1793   1 iGikAmseiaellgksedaekyssiAkeyakkweelaldgdhltlaYgkesswsllYNlyaDklLglnlvpqsvydkqsafYktvaqkyGlplDsrht 98 
                  +G++ +se+a++lg  + aeky+ iAk++a kwee+a +g+h++la+++e++ws++YN+++Dk+++lnl+p++v+dk+ ++Y t++++yGlplDsr++
  VIMSS353008   1 MGVAGYSEMAHMLGLYDVAEKYAGIAKKMAVKWEEMANEGNHYRLAFDRENTWSQKYNMIWDKMWNLNLFPNNVIDKEVSYYLTKQNPYGLPLDSRKE 98 
                  79************************************************************************************************ PP

      DUF1793  99 ytksdWelfaaavasdkstrdelissvakflnetktrvpftdlydtetgelpesvgfrarpvvGGhFalL 168
                  ytksdW +++aa++ d++t++++i++++k++net++rvp++d+++t++g++ +   frar+v+GG+++ +
  VIMSS353008  99 YTKSDWIMWIAAMSPDQDTFEQFINPLYKYINETTSRVPISDWHHTDSGKWVG---FRARSVIGGYWMQV 165
                  **********************************************9999777...***********986 PP



Or compare VIMSS353008 to CDD or PaperBLAST