VIMSS357274 has 294 amino acids
Query: DUF3298 [M=83]
Accession: PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-24 70.5 4.2 9.4e-24 70.5 4.2 2.1 3 VIMSS357274
Domain annotation for each sequence (and alignments):
>> VIMSS357274
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.5 0.0 0.58 0.58 13 26 .. 20 33 .. 4 45 .. 0.49
2 ? -1.8 0.0 0.36 0.36 19 20 .. 121 122 .. 80 161 .. 0.65
3 ! 70.5 4.2 9.4e-24 9.4e-24 3 81 .. 196 279 .. 196 281 .. 0.97
Alignments for each domain:
== domain 1 score: -2.5 bits; conditional E-value: 0.58
DUF3298 13 alselikkqlkkqa 26
+l ++++ k+++
VIMSS357274 20 PLPTDLQAEVKARF 33
23333344444444 PP
== domain 2 score: -1.8 bits; conditional E-value: 0.36
DUF3298 19 kk 20
k
VIMSS357274 121 NK 122
22 PP
== domain 3 score: 70.5 bits; conditional E-value: 9.4e-24
DUF3298 3 lFkpgsdylealselikkqlkkqaeeqeleeyeeleee.....fdaddisaydnFyltddgl.vfyfnpYeiaPyaaGaieftiP 81
+Fk++ y++++s +ik+q++ q+++++++ y++++e+ +++i++++ Fy++++ v++f+++eiaPy++G++ef+iP
VIMSS357274 196 IFKNDF-YIDVISSEIKQQIADQMKNDSNKIYWSEKEDapsdvQPFKKIKKDQPFYINEKHQlVIVFPQGEIAPYYMGTPEFVIP 279
799996.**************************************************999888*********************9 PP
Or compare VIMSS357274 to CDD or PaperBLAST