PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3629256 to PF09829 (DUF2057)

VIMSS3629256 has 189 amino acids

Query:       DUF2057  [M=192]
Accession:   PF09829.14
Description: Uncharacterized protein conserved in bacteria (DUF2057)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.1e-30   91.5   7.5    4.7e-30   91.3   7.5    1.0  1  VIMSS3629256  


Domain annotation for each sequence (and alignments):
>> VIMSS3629256  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.3   7.5   4.7e-30   4.7e-30      14     192 .]       2     183 ..       1     183 [. 0.83

  Alignments for each domain:
  == domain 1  score: 91.3 bits;  conditional E-value: 4.7e-30
       DUF2057  14 dgkkvksslfsga.ssleLtdGehqivvryeelvredsdsdshelvkSepvivtfda.eadqeltlklpklrn.areakafakspqikLtdksgks. 106
                   +g++v+s+lf+++ +++++++Ge  + vry+e++ e+ +  +h++vkS +v ++  a +++q+++l++ + ++  ++ak++a++p++ L +++++  
  VIMSS3629256   2 NGQEVNSGLFRSSkNNYKVDAGETSLSVRYQEYF-EHLS-GEHDIVKSGVVTIQTPAlKDGQTYKLAMVDAPKqFEQAKKYAEQPTVALYNSNNELi 96 
                   9***********99********************.5555.778*************99*********9876655*****************988886 PP

       DUF2057 107 vavkqdklk.keglqigrnyekelaeynqsgaaa.aavaaaaaaaaaaaaaaaqkaaasaqgeataeqmLqywyqqAdketRkeFlaW 192
                   v+ + ++ +  +++++g  ++  ++ + +s++++ +av aaa+ +++ a+a+++++ +++   +t +q L  ++++++k++R++F+aW
  VIMSS3629256  97 VQQTGANNEaRPWFASGLLGK-VTDFTTKSSKQQpDAVYAAAKPTTTQANAPVATTMPATGVAQTNDQRLAEIWKKSSKAERQKFMAW 183
                   778888888777787774443.3333333333335777777777888888888888888888888899******************** PP



Or compare VIMSS3629256 to CDD or PaperBLAST