VIMSS3630789 has 595 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-256 837.9 4.3 1.9e-256 837.8 4.3 1.0 1 VIMSS3630789
Domain annotation for each sequence (and alignments):
>> VIMSS3630789
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 837.8 4.3 1.9e-256 1.9e-256 2 541 .. 4 593 .. 3 595 .] 0.99
Alignments for each domain:
== domain 1 score: 837.8 bits; conditional E-value: 1.9e-256
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
ar l++atG+kded++kPiiavvns+t++vPghvhlkdl++lv++ei+aaGgvakefntiav+DGiamgh+Gm+ysLpsr++iaDsve++v+ah++D
VIMSS3630789 4 ARGLWRATGMKDEDFGKPIIAVVNSFTQFVPGHVHLKDLGQLVAAEIQAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDLIADSVEYMVNAHCAD 100
689********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
a+v+is+CDki+PGmlmaa+rlniP+++vsGGpmeagk+k+ + + +d+++a++ +a++ ++ee+ e+ersacPt+gsCsG+ftansm+clteal
VIMSS3630789 101 AMVCISNCDKITPGMLMAAMRLNIPVVFVSGGPMEAGKVKFRGDEKAIDLVDAMVVAADDSYTDEEVAEFERSACPTCGSCSGMFTANSMNCLTEAL 197
*****************************************9999**************************************************** PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
GlslPg++++ at+a++k+l+ k+g+ ivel k++++ Pr+i+tk+af+na+tld+a+GGstntvLhlla+a+ea+v++++dd+d+lsr+v
VIMSS3630789 198 GLSLPGNGSIVATHANRKKLFLKAGQLIVELAKRYYEqndasilPRSIATKAAFKNAMTLDIAMGGSTNTVLHLLAAANEAEVDFTMDDIDELSRRV 294
************************************************************************************************* PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vd 346
P+l+k++P+ + v +ed+hraGG++a+l+eld+++ll+ + tv ktl++ l+k +++r +
VIMSS3630789 295 PVLSKVAPAKQDVhMEDVHRAGGIMAILGELDRANLLDVSVPTVHEKTLKDALDKWDIIRtedpdvyefyrsspggvptqvafsqnryystldgdRE 391
**********9999*****************************************************************************887666 PP
TIGR00110 347 qdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvgl 443
+ vir+ +++++k+gglavL+Gn+a +G++vk+agv+e+ilkf+G+a+vfes+++a+eailg ++k+GdvvviryeGP+GgPGm+emL+Pts+l++
VIMSS3630789 392 KGVIRNAEHAFSKDGGLAVLYGNIALDGCIVKTAGVDESILKFTGSARVFESQDAAVEAILGNEIKAGDVVVIRYEGPRGGPGMQEMLYPTSYLKSK 488
67*********************************************************************************************** PP
TIGR00110 444 GLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvs 533
GLgk++aL+tDGrfsGg++GlsiGhvsPeaaegGai+lvedGD+i+iDi+nr+++l+++++ la+rr +++k++ r+v+ aL+ ya +
VIMSS3630789 489 GLGKDCALVTDGRFSGGSSGLSIGHVSPEAAEGGAIGLVEDGDTIEIDIPNRTIHLNIDDATLAHRRTVQEAKGWhpkeerkRKVSKALKVYAMHTT 585
*************************************************************************99999999999************* PP
TIGR00110 534 sadkGavl 541
sa kGav+
VIMSS3630789 586 SAAKGAVR 593
******97 PP
Or compare VIMSS3630789 to CDD or PaperBLAST