PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS363747 to PF07233 (DUF1425)

VIMSS363747 has 125 amino acids

Query:       DUF1425  [M=96]
Accession:   PF07233.16
Description: Protein of unknown function (DUF1425)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-30   91.0   0.0    2.1e-30   90.8   0.0    1.0  1  VIMSS363747  


Domain annotation for each sequence (and alignments):
>> VIMSS363747  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.8   0.0   2.1e-30   2.1e-30       1      95 [.      31     124 ..      31     125 .] 0.98

  Alignments for each domain:
  == domain 1  score: 90.8 bits;  conditional E-value: 2.1e-30
      DUF1425   1 qelvidssvlasrvsveelktrrsngllrasvvlenksktdltlqYrFyWyDedGlevepeaepwqsltlhgkesvtlqavapnprAskfrlyvr 95 
                  q+lv++ss la+++s+e++ ++ s+ +  as++++n++++++t++YrFyWyD++Gle++p  e  +s+t+++++ vtl + a+   A+k+rly++
  VIMSS363747  31 QSLVMESSLLAAGISAEKPVLSTSDIQPSASSTIYNERQEPVTVHYRFYWYDARGLEMHPL-ERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLY 124
                  789*********************************************************9.*******************************97 PP



Or compare VIMSS363747 to CDD or PaperBLAST