VIMSS366566 has 398 amino acids
Query: DUF898 [M=336]
Accession: PF05987.17
Description: Bacterial protein of unknown function (DUF898)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-52 165.0 29.0 7.8e-52 162.5 29.0 1.8 1 VIMSS366566
Domain annotation for each sequence (and alignments):
>> VIMSS366566
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 162.5 29.0 7.8e-52 7.8e-52 2 316 .. 13 370 .. 12 385 .. 0.83
Alignments for each domain:
== domain 1 score: 162.5 bits; conditional E-value: 7.8e-52
DUF898 2 lrvaFtGsggeyfriwivNllLtivTLGiYsaWakvrtrrYfygnTrldgspfeYtatplellkGrlialvl.lvlyslasavspllallllllllll 98
+ + F+G+g+ yf i +vN+lLti+TLGiY +Wa ++ +rY+y n +++g++f Y t+ +++ l+ +++ +++++++sa pl++ +l+llll+l
VIMSS366566 13 HSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFyFAILMTVSADMPLVGCVLTLLLLVL 110
789************************************************************998875554155555556666************** PP
DUF898 99 lpwlivrslrFrlrntsyrgirfgfdgslaeaykaflllpllal..................................ltlglllPlaearqkrylvn 162
l ++ ++lr+++ +ts +g+rf+f++sl ++ ++++ lp+l++ +++g+ + + ++l++
VIMSS366566 111 LIFMAAKGLRYQALMTSLNGVRFSFNCSLKGFWWVTFFLPILMAigmgtvffistkmlhanssssviisvvlmaivgiVSIGIFNGTLYSLVMSFLWS 208
********************************************66666666666666666666666666666655555555555************* PP
DUF898 163 ntryGterfsfeatagdfykafllalllfllglvlavlllvllaaalleakaleaaaeaka.........lavllllalllllllllalayvkarlfn 251
nt++G +rf++++++ ++k ++la+l +l +l++a+ +++ + ++++ + +++ ++++ l++++++++++ y++++l+n
VIMSS366566 209 NTSFGIHRFKVKLDTAYCIKYAILAFLALLPFLAVAGYIIFDQILNEYDSSGYA---NDDIenlqqfmemQRKMIIAQLIYYFGIAVSTSYLTVSLRN 303
************************998888888777777665444333333333...22223457788875556666677779*************** PP
DUF898 252 lvwnatslgg..arfssslrarrlvwlllsnllltlltLGlllpwakvrlaryllesltveaegdld 316
++++++sl++ +rf+s+l+ ++ + +++ +t Gl++p++k+ + ++++ + ++ d
VIMSS366566 304 HFMSNLSLNDgrIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDL 370
********9879********************************************99998876654 PP
Or compare VIMSS366566 to CDD or PaperBLAST