VIMSS3707548 has 562 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-239 779.7 3.0 8.5e-239 779.5 3.0 1.0 1 VIMSS3707548
Domain annotation for each sequence (and alignments):
>> VIMSS3707548
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 779.5 3.0 8.5e-239 8.5e-239 1 542 [. 14 556 .. 14 557 .. 0.99
Alignments for each domain:
== domain 1 score: 779.5 bits; conditional E-value: 8.5e-239
TIGR00110 1 aarallkatGlkd..edlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkah 95
+ar+ll+atG + d++kP++a++nsy++ivPghvhl++la+++ke+i++aG++++efnti+v+DGiamgh Gm+ysLpsreiiaD+ etv++ah
VIMSS3707548 14 PARSLLHATGALKspTDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAETVINAH 110
579*******866236********************************************************************************* PP
TIGR00110 96 alDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclt 192
++D++ i++CDki+PGm++aa+r+n+Pai+ sGGpm+ag + ++ ++l+++feavg+ ++g +s ee ++e++acPt+gsC+G+ftansm+cl+
VIMSS3707548 111 WFDGVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTLSSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLM 207
************************************************************************************************* PP
TIGR00110 193 ealGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPlla 289
e+lGl+lP+++t+la+s +++e++++++ ++ve +k+++kPrdi+t+ea+++a++ld+a+GGstntvLh+laia+eag++++l++++ +++++P l+
VIMSS3707548 208 EVLGLALPYNGTALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLHTLAIANEAGIDYDLERINAIAKRTPYLS 304
************************************************************************************************* PP
TIGR00110 290 klkPsgkkviedlhraGGvsavlkeldk.egllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveed 385
k++Ps+++ ++d+h+aGGv+a+++el k +g+lh d +tvtGktl e+ e +++ + dvi++ld p+ ++ggl +L+Gn+a++Gav+k++gv+ +
VIMSS3707548 305 KIAPSSSYSMHDVHEAGGVPAIINELMKkDGTLHPDRITVTGKTLRENNEGKEIK--NFDVIHPLDAPYDAQGGLSILFGNIAPKGAVIKVGGVDPS 399
*************************987589*********************999..99************************************** PP
TIGR00110 386 ilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialv 482
i +f+ +a f+s++ea+eai ++ v++G+vvviryeGPkGgPGm+emLaPts +vg GLgk+vaLitDGrfsG+trG+++Gh+sPeaa+gG+ial+
VIMSS3707548 400 IKTFTRKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALI 496
************************************************************************************************* PP
TIGR00110 483 edGDkikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
edGD+i+iD++nr+l+++ e+ la+rr++ ++ +a+ + g+La+y+ lv+sa++G+v++
VIMSS3707548 497 EDGDEITIDLTNRTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQ 556
**********************************************************97 PP
Or compare VIMSS3707548 to CDD or PaperBLAST