VIMSS3726080 has 832 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-28 85.0 0.0 1.5e-27 82.8 0.0 1.9 1 VIMSS3726080
Domain annotation for each sequence (and alignments):
>> VIMSS3726080
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 82.8 0.0 1.5e-27 1.5e-27 3 256 .. 614 831 .. 612 832 .] 0.83
Alignments for each domain:
== domain 1 score: 82.8 bits; conditional E-value: 1.5e-27
Met_synt_B12 3 eelveyidWtpffq.aWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrqqae 98
+e+ ++id + f+ +W+l+gk ++ ++ ++l+++ + +ii+ekl++ + v+g f++++++ + v + + +++ + r
VIMSS3726080 614 DEVWQLIDKKSLFKlSWGLRGK-----AGSESEADHEQLLSQWK---IRIIREKLFEPEVVYGYFKCHNKDGKLSVE---NPRGDDVSFDFPRST-- 697
6777888887766536888888.....23334455556665433...48999*****************99999993...333446788888877.. PP
Met_synt_B12 99 keegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYs.ailvkaladrLaeAfaellhekvrkelWgyakdeklsneelikek 194
+ ++lcl+D+ + +D++++ avt+g ++ ++++++++e d+Y+ a ++ la +aeA+ae++++k++ el +l+
VIMSS3726080 698 ---KPEHLCLTDYFGD-----DDVVAFQAVTVGNKVADIIEQWNKE-DKYTdAYYLHGLAVEVAEALAEWINRKIKSEL-------NLD-------- 770
...3568******987.....699********************99.8886256899******************9972.......333........ PP
Met_synt_B12 195 YqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFa 256
g R++ G+p+cpd +++ +++ll+ ++ g+eLtes ++P++s +++++ hp+a+yF
VIMSS3726080 771 AGGLRYSWGFPSCPDVLQHQLVWKLLEPQK-SGMELTESGQIIPEQSTAAIVVHHPKAQYFV 831
389*************************99.******************************6 PP
Or compare VIMSS3726080 to CDD or PaperBLAST