VIMSS3726080 has 832 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-27 83.3 0.0 6.3e-27 80.7 0.0 2.0 1 VIMSS3726080
Domain annotation for each sequence (and alignments):
>> VIMSS3726080
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 80.7 0.0 6.3e-27 6.3e-27 2 256 .. 613 831 .. 612 832 .] 0.84
Alignments for each domain:
== domain 1 score: 80.7 bits; conditional E-value: 6.3e-27
Met_synt_B12 2 leelveyidWtpffq.awelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrqqa 97
++e+ ++id + f+ +w l+gk ++ ++ ++l+++ +ii+ekl++ + v+g f++++++ + v + + + + + r
VIMSS3726080 613 MDEVWQLIDKKSLFKlSWGLRGKA-----GSESEADHEQLLSQW---KIRIIREKLFEPEVVYGYFKCHNKDGKLSVE---NPRGDDVSFDFPRST- 697
567788888877775468888883.....334445555666543...348999*****************99999993...333456788888877. PP
Met_synt_B12 98 ekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYs.ailvkalaDrLaeAfaellhekvrkelWgyakdeklsneelike 193
+ ++lcl+D+ + +D++++ avt+g ++ ++++++++e D+Y+ a ++ la +aeA+ae++ +k++ el +l++
VIMSS3726080 698 ----KPEHLCLTDYFGD-----DDVVAFQAVTVGNKVADIIEQWNKE-DKYTdAYYLHGLAVEVAEALAEWINRKIKSEL-------NLDA------ 771
....4578******988.....699********************99.99972567999*****************9973.......4444...... PP
Met_synt_B12 194 kYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFa 256
G R++ G+p+cpd +++ +++ll+ ++ g+eLtes ++P++s +++++ hp+++yF
VIMSS3726080 772 --GGLRYSWGFPSCPDVLQHQLVWKLLEPQK-SGMELTESGQIIPEQSTAAIVVHHPKAQYFV 831
..8**************************99.******************************6 PP
Or compare VIMSS3726080 to CDD or PaperBLAST