VIMSS37345 has 109 amino acids
Query: UPF0060 [M=107]
Accession: PF02694.19
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-55 170.9 9.4 4.6e-55 170.7 9.4 1.0 1 VIMSS37345
Domain annotation for each sequence (and alignments):
>> VIMSS37345
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 170.7 9.4 4.6e-55 4.6e-55 1 107 [] 2 109 .] 2 109 .] 0.99
Alignments for each domain:
== domain 1 score: 170.7 bits; conditional E-value: 4.6e-55
UPF0060 1 vlrsillfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqp.aafGrvyaayGGvfvvlallwglvvdgvkldlydwiGalialvGv 98
+l++illfl+a+laeigG+ylvwlwlreak++ +++++a++l+vyg+l+t+q+ ++fGrvyaayGGvf+vla+lwg++vd++++dlydwiGa+i+l+Gv
VIMSS37345 2 MLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSfPSFGRVYAAYGGVFIVLAVLWGWLVDRKTPDLYDWIGAFICLIGV 100
799************************************************************************************************ PP
UPF0060 99 lvilyaprg 107
+vil+aprg
VIMSS37345 101 CVILFAPRG 109
*******96 PP
Or compare VIMSS37345 to CDD or PaperBLAST