VIMSS380343 has 559 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.2e-23 67.3 0.0 1.3e-22 66.8 0.0 1.2 1 VIMSS380343
Domain annotation for each sequence (and alignments):
>> VIMSS380343
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.8 0.0 1.3e-22 1.3e-22 4 160 .. 15 197 .. 12 198 .. 0.89
Alignments for each domain:
== domain 1 score: 66.8 bits; conditional E-value: 1.3e-22
Cas_Cas4 4 kinyyliCkrklwlfsheitmeeeselvelGklihe.............esykrek...kevei.se....sikiDvvkkekeklvvvevKkskki.. 78
++n +++C+r ++l+ + + ++++ +v+ G + h + ++++ ++v++ se ++kiD+v+ e+ + +v++K++k+
VIMSS380343 15 MLNEHVYCPRLAYLMWVQGEFSHNEFTVD-GVIRHRrvdagggvlpsetQ--EDSRihaRSVSLsSErlgiTAKIDLVEGEGAYVSPVDYKRGKRPhv 109
6899*************************.*999999*******986432..33225569***955599999*******999999**********988 PP
Cas_Cas4 79 ....eeaaklQllyYlllLekkgieak.Gvleypkekkreevelteedreeleeaikeieei.issekppepkkkkiCkkCayaelCl 160
e ++Ql+++ llL+++g + G+l+++ +++r+ v++++e ++ ai+e+ + +s + pp+ +++++C +C++ +Cl
VIMSS380343 110 aggaYEPERVQLCAQGLLLREHGFASDgGALYFVASRERVPVAFDDELIGRTLAAIDEMGRTaLSGTMPPPLEDSPKCPRCSLVGICL 197
88867888**************************************************977615566888889999***********7 PP
Or compare VIMSS380343 to CDD or PaperBLAST