VIMSS393284 has 555 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-239 781.4 6.3 2.5e-239 781.2 6.3 1.0 1 VIMSS393284
Domain annotation for each sequence (and alignments):
>> VIMSS393284
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 781.2 6.3 2.5e-239 2.5e-239 1 542 [. 14 554 .. 14 555 .] 0.99
Alignments for each domain:
== domain 1 score: 781.2 bits; conditional E-value: 2.5e-239
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++r+ll+a+Gl+ e+l++P+++vvns +e+vPgh+hl+ +a++vk++++aaGg+++ef iav+DG+am+heGm++sLpsreiiaDs+e +++ah +D
VIMSS393284 14 PHRSLLYALGLTREELSRPLVGVVNSANEVVPGHIHLHTIAEAVKAGVRAAGGTPMEFPAIAVCDGLAMNHEGMRFSLPSREIIADSIEIMATAHPFD 111
69************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
alv i++CDk vPGmlma+lr+n+P+i++sGGpm+ag + ++ dl+ vfe+vg++ +g+++e+ele++ ++acP++gsC+G+ftansm+cl+e++G
VIMSS393284 112 ALVFIPNCDKSVPGMLMAMLRMNVPSILISGGPMMAGTGN-GKAADLITVFEGVGMVRQGRMTEDELEQLSETACPGCGSCAGMFTANSMNCLSETIG 208
*************************************999.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
l+lPg++t++a sa + +lak++g+r++el++++ikPrdi+t++a+ na++ d+alG stntvLhl+a+ +eag++l+l fd++srk+P l+kl+P+
VIMSS393284 209 LALPGNGTTPANSAARVRLAKHAGMRVMELLERDIKPRDIVTEKAVANAVAADMALGCSTNTVLHLPAVFAEAGLDLTLGIFDEVSRKTPNLCKLSPA 306
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
g++ i+dlhraGG++av+ eldk+g +h+daltvtG+t++e+l+ d+dvir++++p++ +gg+a+L+G+la+eGavvk+++v+ ++++ + +
VIMSS393284 307 GDQHIQDLHRAGGIPAVMAELDKAGRIHRDALTVTGRTVGENLDALGAAVRDHDVIRPMEKPYSPQGGIAILYGSLAPEGAVVKQSAVAPEMMQRTAR 404
************************************************************************************************** PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkiki 490
a+vfesee+a eai++ ++++Gd ++iryeGPkGgPGmremL Pt+a++g+GLg +vaLitDGrfsGgtrG +iGhvsPeaa gG+i+lv++GD+i+i
VIMSS393284 405 ARVFESEEAAFEAIMAQRIEKGDAIIIRYEGPKGGPGMREMLSPTAAIAGIGLGADVALITDGRFSGGTRGAAIGHVSPEAADGGPIGLVREGDMIEI 502
************************************************************************************************** PP
TIGR00110 491 DienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
Di++rkldl v+e+e+++rra+ ++ ++ ++ +L++y++lv+sa +Gav +
VIMSS393284 503 DIPARKLDLLVDEAEMERRRAAFTPVVKEVTSPLLKRYSRLVTSAANGAVYK 554
************************9999999******************976 PP
Or compare VIMSS393284 to CDD or PaperBLAST