VIMSS393616 has 260 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-16 44.7 0.1 7.9e-16 44.1 0.1 1.2 1 VIMSS393616
Domain annotation for each sequence (and alignments):
>> VIMSS393616
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.1 0.1 7.9e-16 7.9e-16 41 108 .. 40 110 .. 4 121 .. 0.81
Alignments for each domain:
== domain 1 score: 44.1 bits; conditional E-value: 7.9e-16
PDH_N 41 eavkea....divllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgksfvgghPmaGte 108
eav++a ++vll+vP v+ +v+ ++ +l+ + ++ D++svK+ +++++++ + +vg+hP++G++
VIMSS393616 40 EAVRQAvhgvQMVLLCVPAAVLDRVAGLMSGILSGNQILADITSVKVLPMQQMRRQYS-GPVVGTHPLFGPA 110
45555544459***********************************************.99*********94 PP
Or compare VIMSS393616 to CDD or PaperBLAST