Align VIMSS394203 to PF14574 (RACo_C_ter)

VIMSS394203 has 554 amino acids

Query:       RACo_C_ter  [M=261]
Accession:   PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-41  128.5   0.0    2.1e-41  127.8   0.0    1.3  1  VIMSS394203  


Domain annotation for each sequence (and alignments):
>> VIMSS394203  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.8   0.0   2.1e-41   2.1e-41       4     249 ..     280     553 ..     278     554 .] 0.88

  Alignments for each domain:
  == domain 1  score: 127.8 bits;  conditional E-value: 2.1e-41
   RACo_C_ter   4 lliDiGTNaEivlgnk.dwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek.......................pkGicGs 77 
                  +l D+GTN+E vl  +    +++s a GPAlEG ++++G  A pgA   ++ +p  l + +   ++ +                       +++i G+
  VIMSS394203 280 VLADLGTNGEFVLALSpAHSIVTSVAMGPALEGIGMTHGSMACPGAATAFSATPLGLVPAVLDAQGIPvvsppaslrpadikaggmaaaqsIRSISGT 377
                  678*********98652678999*********************************99988877776678889999999999999999999******* PP

   RACo_C_ter  78 Giidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeeset.......ekdivitekDidelirakaAiyagietLleevglevedidkv 168
                  G ++li+ ll++g i+ +g++n++       + ++  + v++++ ++ t       + +++++ +Di+e+++ kaA   ++e Ll e+ l+  d+++v
  VIMSS394203 378 GYLSLITVLLQTGAITPDGQFNTQP---SSVAGRRLARAVVHDSPQAPTqgaclrlNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRV 472
                  *********************8874...3444444455555544433221111222679*************************************** PP

   RACo_C_ter 169 ylaGafGsyidiekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarkityielavekeFmdefvaalfl 249
                  +laGa G+++ +++  t+G lP+  ++ ++++GNt+l+gA  +l+ ++ r+++++ +      +l ++++F+ +f++ + +
  VIMSS394203 473 FLAGALGQHVSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSDPAFTTNFMRHMRF 553
                  ***********************99***************************************************99865 PP

Or compare VIMSS394203 to CDD or PaperBLAST