VIMSS40090 has 217 amino acids
Query: UPF0029 [M=107]
Accession: PF01205.25
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.2e-46 140.9 0.6 1.1e-45 140.3 0.0 1.6 2 VIMSS40090
Domain annotation for each sequence (and alignments):
>> VIMSS40090
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 140.3 0.0 1.1e-45 1.1e-45 2 106 .. 20 123 .. 19 124 .. 0.96
2 ? -2.4 0.1 0.26 0.26 1 25 [. 155 179 .. 155 185 .. 0.77
Alignments for each domain:
== domain 1 score: 140.3 bits; conditional E-value: 1.1e-45
TEEEEEEEEE-SSHHHHHHHHHHH--..TTSSEEEEEEE...ETTE.EEEE-TTSSTTSSHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHHHHHHH CS
UPF0029 2 kSkFiahaapveseeeakelleelkkehkkAtHnvyAyrieeeedeierssDdgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvrays 100
kS+Fi+h+ +v++e+ea+e+++++kk+h++AtHn++Ay+i e+d+i++++DdgEpsgtAG p+levl+k++l+++++vvtRyfGGikLGaggl+ray
VIMSS40090 20 KSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVI-GENDHIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYG 117
9***************************************.44558***************************************************** PP
HHHHHH CS
UPF0029 101 kaakea 106
k+++e
VIMSS40090 118 KSVSEG 123
*99875 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.26
TTEEEEEEEEE-SSHHHHHHHHHHH CS
UPF0029 1 kkSkFiahaapveseeeakelleel 25
++S+F+ ++ +++ e+++++ee
VIMSS40090 155 RESQFLLKEIHYSENVEFETYVEEK 179
5789999999999998988888854 PP
Or compare VIMSS40090 to CDD or PaperBLAST