VIMSS41775 has 607 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.9e-258 843.0 2.0 5.6e-258 842.8 2.0 1.0 1 VIMSS41775
Domain annotation for each sequence (and alignments):
>> VIMSS41775
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 842.8 2.0 5.6e-258 5.6e-258 2 542 .. 18 606 .. 17 607 .] 0.99
Alignments for each domain:
== domain 1 score: 842.8 bits; conditional E-value: 5.6e-258
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
aral++atG++d d++kPiiavvns+t++vPghvhlkdl++lv+ ei aaGgvakefntiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++Da+
VIMSS41775 18 ARALWRATGMTDGDFQKPIIAVVNSFTQFVPGHVHLKDLGQLVAGEIAAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADAM 116
79************************************************************************************************* PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlsl 199
v+is+CDki+PGmlmaalrlniP+++vsGGpmeagk+kl++ + +d+++a++++a++ +see++e +ersacPt+gsCsG+ftansm+cltealGlsl
VIMSS41775 117 VCISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGKVKLGDGEHALDLVDAMVMAADDSVSEEDIELVERSACPTCGSCSGMFTANSMNCLTEALGLSL 215
*************************************************************************************************** PP
TIGR00110 200 Pgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
Pg++++lat++++++l+k++g+ iv+l k++++ Pr+++t +afena+tld+ +GGstntvLhlla+a+eagv+++++d+d+lsr+vP+l+k+
VIMSS41775 216 PGNGSVLATHSDRQNLFKRAGHLIVDLAKRYYEgddesvlPRSVATYDAFENAMTLDISMGGSTNTVLHLLAAAHEAGVDFTMQDIDQLSRRVPVLCKV 314
*************************************************************************************************** PP
TIGR00110 292 kPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr.................................vdqd..virsld 354
+P+ + v +ed+hraGG++++l+eld++gll++d+ tv +++ l++ +v r + virs +
VIMSS41775 315 APAKNDVhMEDVHRAGGIMGILGELDRAGLLKTDVSTVHAPSMSAALNEWDVVRnenhhefyraapggiptvfafsqsrryreldtdR--EagVIRSAE 411
****9999*********************************************99****************************77433..366****** PP
TIGR00110 355 npvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLit 453
++++++gglavL+Gnlae+G++vk+agv+e+ilkf Gpa+vfes+++ ++ail+g+vkeG+vv+iryeGP+GgPGm+emL+Pts+l++ GLgk++aL+t
VIMSS41775 412 HAFSQDGGLAVLYGNLAEDGCIVKTAGVDESILKFSGPARVFESQDASVDAILSGEVKEGEVVLIRYEGPRGGPGMQEMLYPTSYLKSKGLGKACALVT 510
*************************************************************************************************** PP
TIGR00110 454 DGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGavld 542
DGrfsGg++GlsiGhvsPeaaegG+i+lve GD i+iDi+nr+++l+v ++ela+rr+k +++++ r++ aL++ya++ +sa++Gav++
VIMSS41775 511 DGRFSGGSSGLSIGHVSPEAAEGGTIGLVETGDLIEIDIPNRTIHLAVPDAELAARRQKREEEGWhpaeprpRKITAALRAYASMTTSASRGAVRN 606
*************************************************************9999999999999********************86 PP
Or compare VIMSS41775 to CDD or PaperBLAST