VIMSS4205947 has 947 amino acids
Query: DUF4988 [M=183]
Accession: PF16378.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-17 49.2 1.5 3e-17 49.2 1.5 2.1 2 VIMSS4205947
Domain annotation for each sequence (and alignments):
>> VIMSS4205947
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 49.2 1.5 3e-17 3e-17 17 174 .. 55 209 .. 48 219 .. 0.70
2 ? -1.5 0.0 0.1 0.1 2 51 .. 858 907 .. 857 926 .. 0.74
Alignments for each domain:
== domain 1 score: 49.2 bits; conditional E-value: 3e-17
DUF4988 17 eqvkalntsitalkalv...eegkvitnvteaaDG.sytltlsdGstitl.......knGkdggkdaPvigvkdteGvyyWvvnGeteflkddngnk 102
+ v+ +nt+++al++l+ +++ + ++ + +G syt+ lsdG ++ + G + + P++g k + yyW+++ + +l +n++k
VIMSS4205947 55 TAVENINTNVKALRKLIeakQQDLAVKTYNPVNNGaSYTIELSDGTSFSMyaqiaalEGGGEDVVYSPKVGAKVEHDEYYWTLD--DVWLTFENDEK 149
578999***********77666667778888888857********9887521111113444446678******88888****95..79********* PP
DUF4988 103 ikvs.GkdgitPvlkvdsegyWevsydkGtsvekildedGkkvkavgkdgkgedaDsffksvvvd.eekvvltL 174
+kv +++++P++ ++ +gyW+v y Gt+ ++ k+v + s fk+v + +e+v +t+
VIMSS4205947 150 VKVLdENNTVAPIVDINTDGYWTVKY--GTKSRTLD----KAV---SGKL-----TSQFKQVSTIgDESVSFTF 209
***9567899**************66..55555551....222...2111.....2334444333244455555 PP
== domain 2 score: -1.5 bits; conditional E-value: 0.1
DUF4988 2 rdevenLkdrvesleeqvkalntsitalkalveegkvitnvteaaDGsyt 51
rd v L+d v +++ + +a +++++ +++ kv t +D t
VIMSS4205947 858 RDAVTALEDGVYTIRIRYRAPSATVNTVDMYINNTKVGTPEFAQTDNDNT 907
88899999999999999999999999998888888888876666666555 PP
Or compare VIMSS4205947 to CDD or PaperBLAST