VIMSS430 has 233 amino acids
Query: DUF502 [M=107]
Accession: PF04367.18
Description: Protein of unknown function (DUF502)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-34 102.8 2.8 2.2e-33 100.7 0.2 2.1 2 VIMSS430
Domain annotation for each sequence (and alignments):
>> VIMSS430
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 2.5 0.2 0.0074 0.0074 4 34 .. 34 63 .. 30 72 .. 0.78
2 ! 100.7 0.2 2.2e-33 2.2e-33 4 107 .] 85 187 .. 81 187 .. 0.95
Alignments for each domain:
== domain 1 score: 2.5 bits; conditional E-value: 0.0074
DUF502 4 lllillvGllarnllgrkllellerlleriP 34
+ i +vG+++ n+l++ ++ ++ ++e+
VIMSS430 34 AITIAVVGMIM-NFLTQPFVGMVSDVFEKFS 63
45677777776.7899******999999875 PP
== domain 2 score: 100.7 bits; conditional E-value: 2.2e-33
DUF502 4 lllillvGllarnllgrkllellerlleriPlvksiYssvkqlvetllgeekkkfkkvvlVeiyprkglyalGFvtgedegelaekegeelvaVfvPtspn 104
++ ++l+G+lar ++ ++ll++ +++l+riP++k++Y++++q+++t++g+++ +fk+vv+V +p++++ +G+v ge + +++ ++ +++Vf+Pt+pn
VIMSS430 85 FFTTVLLGFLARLMIFKSLLSVYDKILHRIPIIKTVYKAAQQVMTTIFGSQSGSFKQVVMVP-FPNREVLCIGLVAGEAPTICSRDADDPMITVFIPTTPN 184
567899********************************************************.9***************987777799************* PP
DUF502 105 pts 107
pts
VIMSS430 185 PTS 187
*97 PP
Or compare VIMSS430 to CDD or PaperBLAST