VIMSS44394 has 502 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-54 171.2 5.3 2.8e-54 170.4 5.3 1.4 1 VIMSS44394
Domain annotation for each sequence (and alignments):
>> VIMSS44394
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 170.4 5.3 2.8e-54 2.8e-54 1 266 [] 31 287 .. 31 287 .. 0.93
Alignments for each domain:
== domain 1 score: 170.4 bits; conditional E-value: 2.8e-54
ABC_transp_aux 1 RlDlTedkrytLseatkellksleepvtitvylsgdllpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteieve 95
++D+T+ k++t+s+ tk+l++s +e+++it+y sg+ l + + ++ ++++++L ++ +s+ k+ ++ id ++ s e+ +gi +++i +
VIMSS44394 31 KIDFTKHKAFTISKVTKNLFSSANETIYITYYNSGS-L-ENYFAFPNQIKNFLISFSDASKCKVIYKEIDADKIS---TPLEH-IGIPSQQIDLR 119
69**********************************.5.67779*****************************99...55555.7********** PP
ABC_transp_aux 96 engk.ssqervypgavisygdkeevipllknnseenlEyeltsaikkltkkekpkigvltghgelsdsseladlleelseny..eveevdldsea 187
+ ++ s+ ++y+g+ i y++k+evip++++ ++nlEy+l++ + kl +++k+++g+ g + l+++ + + + e +++ + e++e+dl++e+
VIMSS44394 120 DINQlSI-LKIYSGIEIIYEGKREVIPVVTE--ISNLEYDLANGLDKLINNTKKVLGLAFGDSTLKEA-H-KNFSEIMKKAFgiEIKEIDLKTEK 209
****888.***********************..889******************************97.4.7899999996666999****9999 PP
ABC_transp_aux 188 e..lpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvaveldslkealaaprdsnledlLekyGvrinpdlVl 266
+ ++++ l+i+ + k+++ee ++++d+f+ n+gk++v+++ ++ + ++ + +p +s l dl+e+yG+++n++++l
VIMSS44394 210 LedIRKDINGLFII-GAKEIDEEIAKKIDDFIVNDGKIFVATSTIDYNPQNPY--GITPIKSSLFDLFESYGIKYNDNIIL 287
89999*********.*******************************9996555..56788******************996 PP
Or compare VIMSS44394 to CDD or PaperBLAST