VIMSS45964 has 558 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-234 764.2 9.8 4.2e-234 764.0 9.8 1.0 1 VIMSS45964
Domain annotation for each sequence (and alignments):
>> VIMSS45964
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 764.0 9.8 4.2e-234 4.2e-234 1 542 [. 14 556 .. 14 557 .. 0.98
Alignments for each domain:
== domain 1 score: 764.0 bits; conditional E-value: 4.2e-234
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
++r+ll+a+Glkded++kP+i+v+nsy++i+Pgh l+d ak++k+ei+++G v++efnti+v+DGiamgheGm+ysLpsre+ia+s+etv++ah+lDa
VIMSS45964 14 PNRSLLRACGLKDEDFDKPFIGVANSYIDIIPGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSRELIANSIETVMNAHQLDA 112
68************************************************************************************************* PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGls 198
l++i++CDki+PGmlm+alr+n+P+i+vsGGpm++g tk +eki+l++vfeavg+y+++k+seee ++ie sacP+ gsCsG+ftansm++l ea+G++
VIMSS45964 113 LICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSSVFEAVGAYESKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIA 211
*************************************************************************************************** PP
TIGR00110 199 lPgsstllatsaekkelakksgkrivel.vkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPsgk 296
l g++t+la s+e++el++k+++ri e+ + + +k r+i+t++a+ na+++d+a+GGs+ntvLh+lai++eagv l+++d++ +s+kv ++ak++Ps +
VIMSS45964 212 LEGNGTILALSKEREELLRKAARRICEIaLDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHMLAISREAGVALDIKDLNFISSKVAHIAKIAPSLN 310
***************************8357899***************************************************************99 PP
TIGR00110 297 kv.iedlhraGGvsavlkeldk..egllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
+v + d+h+aGGvsav+ e++ ++l+ dalt+tG++l+e+l+++k++ d+++ir++dn+++k ggla+L+Gnla++G+v+k+ag+ kf+G+
VIMSS45964 311 SVyMDDIHKAGGVSAVMAEISSrqGHILELDALTITGESLKERLKNAKIK--DENIIRKVDNAYSKVGGLAILFGNLAKQGCVIKTAGIIG-ERKFKGK 406
877****************98632457899********************..************************************988.58***** PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiD 491
a f+s++ea+++i++gkv++G+v viryeGPkGgPGm+emL Pts l+g+GLg +vaLitDGrfsG+trGls+Gh+sPeaaegG i+l++dGD+i+iD
VIMSS45964 407 AVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSPTSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEID 505
*************************************************************************************************** PP
TIGR00110 492 ienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
+++ +++ +vseee+a+r+++ ++++ + +L+ y+klvs+a+kGavld
VIMSS45964 506 VDAYTIHANVSEEEIAKRKKEFALPQKEVSSRWLRMYQKLVSNASKGAVLD 556
**************************9999*******************98 PP
Or compare VIMSS45964 to CDD or PaperBLAST