VIMSS502188 has 619 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-254 829.1 3.8 9.4e-254 828.9 3.8 1.0 1 VIMSS502188
Domain annotation for each sequence (and alignments):
>> VIMSS502188
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 828.9 3.8 9.4e-254 9.4e-254 2 542 .. 18 613 .. 17 614 .. 0.98
Alignments for each domain:
== domain 1 score: 828.9 bits; conditional E-value: 9.4e-254
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG+kd d++kPiiavvns+t++vPghvhl+dl+ lv+ eieaaGgvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da
VIMSS502188 18 ARALWRATGMKDGDFGKPIIAVVNSFTQFVPGHVHLRDLGALVASEIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl...sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
+v+is+CDki+PGmlmaa+rlniP+++vsGGpmeagk++ ++ i ++d+++a++++a++++s++e ee+ersacPt+gsCsG+ftansm+cltea
VIMSS502188 116 MVCISNCDKITPGMLMAAMRLNIPVVFVSGGPMEAGKITSpvdGKVIAKLDLVDAMIKAADPNVSDAEAEEVERSACPTCGSCSGMFTANSMNCLTEA 213
**************************************98888999**************************************************** PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
+Gl+lPg++t+ at+a +k l++++g+ +vel++++++ Pr+i+tk+afena+tld+a+GGstntvLhlla+a+eagv+++++d+dr+sr+v
VIMSS502188 214 IGLALPGNGTIVATHAWRKGLFEQAGRLVVELCRRYYEqddasvlPRSIATKSAFENAMTLDVAMGGSTNTVLHLLAAAQEAGVDFTMSDIDRISRRV 311
************************************************************************************************** PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdq 347
P+l+k +P+++k+ ied+hraGG+ ++l+el +++ll+ + +v tl+e +++ +++
VIMSS502188 312 PCLCKAAPATDKYhIEDVHRAGGILGILGELGRADLLDLSCGNVHSGTLGEAINQWDINGgageaaqkffraapggipttvafsqdatfltldmdR-- 407
************99********************************************999******************************87544.. PP
TIGR00110 348 d..virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvgl 443
+ +ir + ++++++gglavL+Gnlae+G++vk+agv+e+ ++f+G+a+vfes+e+a+e+ilg +v++Gdvv+iryeGPkGgPGm+emL+Pts+l++
VIMSS502188 408 QtgCIRDKAHAYSQDGGLAVLYGNLAEKGCIVKTAGVDESQWVFTGRARVFESQEDAVEGILGDRVQAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSK 505
355*********************************************************************************************** PP
TIGR00110 444 GLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklv 532
GLgk++aL tDGrfsGg++Gl+iGh sPeaaegG+i+lve+GD+i+iDi+nr+++l+v + laerra+++++++ r v+ aL++ya l+
VIMSS502188 506 GLGKTCALFTDGRFSGGSSGLVIGHASPEAAEGGTIGLVEEGDTIEIDIPNRRIHLAVGDTVLAERRAAMQARGEqawqpvdreRVVSQALRAYAALA 603
***********************************************************************9999999****999************* PP
TIGR00110 533 ssadkGavld 542
+sad+Gav+d
VIMSS502188 604 TSADRGAVRD 613
********97 PP
Or compare VIMSS502188 to CDD or PaperBLAST