VIMSS5166228 has 554 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-257 840.9 7.4 2.4e-257 840.7 7.4 1.0 1 VIMSS5166228
Domain annotation for each sequence (and alignments):
>> VIMSS5166228
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 840.7 7.4 2.4e-257 2.4e-257 1 542 [. 14 552 .. 14 553 .. 1.00
Alignments for each domain:
== domain 1 score: 840.7 bits; conditional E-value: 2.4e-257
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahal 97
++ral+ka+G++de+le+P+i+vvns +eivPgh+hl+++a++vk++i+ aGg+++ef+ i+v+DGiamgh+GmkysL++re+iaDs e+++ ah +
VIMSS5166228 14 PHRALFKAMGYTDEELERPLIGVVNSRNEIVPGHIHLDKIAEAVKAGIRMAGGTPVEFGAIGVCDGIAMGHTGMKYSLATRELIADSCEAMALAHSF 110
69*********************************************************************************************** PP
TIGR00110 98 DalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
D++v i++CDkivPGmlmaa+r+n+PaivvsGGpm + + + +++dl +vfeavg+y+agk++e+e+ e+e+ acP++gsCsG+ftansm+clte+
VIMSS5166228 111 DGMVFIPNCDKIVPGMLMAAARINVPAIVVSGGPMLSLRHN-DKNLDLNSVFEAVGAYKAGKMTEKEVWEYEEKACPGCGSCSGMFTANSMNCLTEV 206
**************************************999.8****************************************************** PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
lG+ lPg++t++a+ ae+ +lakk+g++ivelv+k+ikP+dilt +afena+++d+alG stn+vLhl+aia+e+g++++ld ++++s+kvP l+kl
VIMSS5166228 207 LGMGLPGNGTVPAVYAERIRLAKKAGMKIVELVEKDIKPSDILTPKAFENALAVDMALGCSTNSVLHLPAIANEVGMEINLDIINEISSKVPNLCKL 303
************************************************************************************************* PP
TIGR00110 292 kPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilk 388
+P+g++ ++dl +aGG++av+kel+k++llh d +tvtGkt+ e++e++kv+ d++virs+dnp++ +gg+avL+Gnla++Gavvk ++v+ ++l+
VIMSS5166228 304 APAGHHHVQDLYAAGGIPAVMKELSKKNLLHLDLITVTGKTVRENIENAKVR--DYEVIRSIDNPYSPTGGIAVLRGNLAPDGAVVKRSAVAPEMLV 398
****************************************************..******************************************* PP
TIGR00110 389 feGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedG 485
++Gpa+vf+se++a+eai +gk+++Gdvv+iryeGPkGgPGmremL Ptsa++g+GL+k+vaLitDGrfsG+trG siGhvsPea++gG+ia+v+dG
VIMSS5166228 399 HKGPARVFDSEDAAIEAIYNGKINKGDVVIIRYEGPKGGPGMREMLSPTSAIAGMGLDKDVALITDGRFSGATRGASIGHVSPEAMAGGPIAIVRDG 495
************************************************************************************************* PP
TIGR00110 486 DkikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
D+i+iDi+n kld+e+ + e+++r +++k++ ++ +kg+L +yaklvssa+kGa+l+
VIMSS5166228 496 DIISIDIPNGKLDVEIPDSEIQKRLKEWKAPAPKITKGYLGRYAKLVSSANKGAILE 552
******************************************************986 PP
Or compare VIMSS5166228 to CDD or PaperBLAST