VIMSS519927 has 336 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-23 69.2 0.0 2.2e-23 68.7 0.0 1.2 1 VIMSS519927
Domain annotation for each sequence (and alignments):
>> VIMSS519927
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 68.7 0.0 2.2e-23 2.2e-23 3 148 .. 24 171 .. 22 179 .. 0.83
Alignments for each domain:
== domain 1 score: 68.7 bits; conditional E-value: 2.2e-23
PDH_N 3 ralrrkgfkvtvigydideekakaalelglvdeatdd.ieavkea....divllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkg 95
ralr+kg v g ++++++a a + g ++ + i+ ++ a ++++la+P+ +i+ l +l++h +++ tDv svKe+v + ++ +
VIMSS519927 24 RALRHKG--VPAFGFNRSPSAARIATKEGF--DVSSSlIQTLERAeaenALIVLATPMPAIASLLDALQEH-APSCGFTDVVSVKEAVYDLVKSRGLQ 116
7899999..888999999998888866554..444444777766655669********************5.799*****************999999 PP
PDH_N 96 ksfvgghPmaGteksGvdaareelfenavviLtPtek..tdkealelvkelleev 148
++vgghPmaGt++sG +a+ elf +a+++ t + + d+e++ l ++++
VIMSS519927 117 SRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFApeADAEWVGLWTDVVNMA 171
*********************************7755447888887766666554 PP
Or compare VIMSS519927 to CDD or PaperBLAST