VIMSS52637 has 200 amino acids
Query: UPF0016 [M=75]
Accession: PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-46 142.4 16.5 2.6e-25 74.9 3.2 2.1 2 VIMSS52637
Domain annotation for each sequence (and alignments):
>> VIMSS52637
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 74.9 3.2 2.6e-25 2.6e-25 3 75 .] 23 96 .. 21 96 .. 0.97
2 ! 73.5 5.5 7.2e-25 7.2e-25 2 75 .] 119 194 .. 118 194 .. 0.95
Alignments for each domain:
== domain 1 score: 74.9 bits; conditional E-value: 2.6e-25
UPF0016 3 sflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
s+++++laE+GDkTql+ ++LA+ry kp++++++++lA++++++la++lG ++a++l+++++k+v +v+Fl+++
VIMSS52637 23 SITTVALAEIGDKTQLLSLLLASRYrKPIPIIAAIFLATLANHALAAWLGVVVADYLSPDILKWVLVVSFLAMA 96
7899*******************************************************************986 PP
== domain 2 score: 73.5 bits; conditional E-value: 7.2e-25
UPF0016 2 tsflliflaElGDkTqlatiaLAary.kpla.VflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
+sf+++f+aE+GDkTq+at +L+a+y ++l+ V++G+tl+++la+++ vl+G+l a+++p l++ v+a lFl+++
VIMSS52637 119 ASFIAFFMAEIGDKTQIATSILGAQYaDALSwVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMA 194
79************************966656*****************************************996 PP
Or compare VIMSS52637 to CDD or PaperBLAST