VIMSS52643 has 613 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-267 874.3 4.7 1.8e-267 874.1 4.7 1.0 1 VIMSS52643
Domain annotation for each sequence (and alignments):
>> VIMSS52643
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 874.1 4.7 1.8e-267 1.8e-267 2 542 .. 18 607 .. 17 608 .. 0.99
Alignments for each domain:
== domain 1 score: 874.1 bits; conditional E-value: 1.8e-267
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
aral++atG+k+ed++kPiiavvns+t++vPghvhlkdl++lv++eieaaGg+akefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da+
VIMSS52643 18 ARALWRATGVKEEDFGKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAM 116
79************************************************************************************************* PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlsl 199
v+is+CDki+PGmlmaa+rlniPai+vsGGpmeagktkls++i+++d+++a+ + a++k+s++++e+iersacPt+gsCsG+ftansm+cltealGls+
VIMSS52643 117 VCISNCDKITPGMLMAAMRLNIPAIFVSGGPMEAGKTKLSDQIIKLDLVDAMMQGADPKVSDAQSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQ 215
*************************************************************************************************** PP
TIGR00110 200 Pgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
Pg+++llat+a++k+l+ ++g+rivel+k++++ Pr+i++k+afenai+ld+a+GGstntvLhlla+a+e +v++++ d+dr+sr+vP+l+k+
VIMSS52643 216 PGNGSLLATHADRKQLFLTAGQRIVELTKRYYEqddasvlPRNIANKAAFENAIALDIAMGGSTNTVLHLLAAAQEGEVEFDMTDIDRMSRQVPHLCKV 314
*************************************************************************************************** PP
TIGR00110 292 kPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvirsld 354
+Ps++k+ +ed+hraGGv+++l+el+++gll++++ tv+G +l+e+l++++v++ ++ +ir +
VIMSS52643 315 APSTQKYhMEDVHRAGGVMGILGELQRAGLLKDQTRTVLGISLQEQLAQYDVKQtqdpavhtmfragpagirttqafsqdcrwdtldddRQEGCIRDKA 413
******99*********************************************99*****************************976544444****** PP
TIGR00110 355 npvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLit 453
++++++gglavLkGnla +G++vk+agv+e+ilkf+Gpa v+es+e+a+++ilgg+vk+GdvvviryeGPkGgPGm+emL+Pt++l+++GLgk++aL+t
VIMSS52643 414 HAFSQDGGLAVLKGNLAIDGCIVKTAGVDESILKFRGPAVVYESQEDAVNGILGGQVKAGDVVVIRYEGPKGGPGMQEMLYPTTYLKSMGLGKQCALLT 512
*************************************************************************************************** PP
TIGR00110 454 DGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea......revkgaLakyaklvssadkGavld 542
DGrfsGgt+GlsiGh sPeaa+gG+i+lv+ GD i+iDi+nr + levse ela+rra+++k ++ r+v+ aL++ya++++sadkGav+d
VIMSS52643 513 DGRFSGGTSGLSIGHASPEAANGGTIGLVRSGDSIAIDIPNRSITLEVSESELAARRAEQDKLGWkpvdrqRTVSLALKAYASMATSADKGAVRD 607
**************************************************************99999999999********************98 PP
Or compare VIMSS52643 to CDD or PaperBLAST