VIMSS53000 has 1226 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-130 419.8 0.0 4.3e-130 419.1 0.0 1.4 1 VIMSS53000
Domain annotation for each sequence (and alignments):
>> VIMSS53000
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 419.1 0.0 4.3e-130 4.3e-130 2 273 .] 940 1210 .. 939 1210 .. 0.99
Alignments for each domain:
== domain 1 score: 419.1 bits; conditional E-value: 4.3e-130
Met_synt_B12 2 leelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrqq 96
l++l++yidWtpff++w+l gkyp+ile+e+vgeeak+lf+dA+a+L+k+++e llka+++++lfpa svgddievy+desr++++++l+ Lrqq
VIMSS53000 940 LATLRPYIDWTPFFMTWSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIEVYSDESRTQVAHVLYNLRQQ 1034
789******************************************************************************************** PP
Met_synt_B12 97 aekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsneeli 191
+ek+ + +n+cl+D+vapkesg++D+iG+favt g+g ++la++++a+ DdY+ai+++a+aDrLaeAfae+lhekvrke+Wgya+de+lsn++li
VIMSS53000 1035 TEKP-KGANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLI 1128
9996.6799************************************************************************************** PP
Met_synt_B12 192 kekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
+e+YqGiRpApGYpacp+h+ek+tl+++l++ee+ig++Lt s+am+P asvsG+yf+hp+s+yFav++i+ dq+++ya+rkg
VIMSS53000 1129 RERYQGIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQPDQLHSYAERKG 1210
********************************************************************************97 PP
Or compare VIMSS53000 to CDD or PaperBLAST