VIMSS53000 has 1226 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-130 419.9 0.0 4e-130 419.2 0.0 1.4 1 VIMSS53000
Domain annotation for each sequence (and alignments):
>> VIMSS53000
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 419.2 0.0 4e-130 4e-130 2 273 .] 940 1210 .. 939 1210 .. 0.99
Alignments for each domain:
== domain 1 score: 419.2 bits; conditional E-value: 4e-130
Met_synt_B12 2 leelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrqq 96
l++l++yidWtpff++W+l gkyp+ile+e+vgeeak+lf+dA+a+L+k+++e llka+++++lfpA s+gddievy+desr++++++l+ Lrqq
VIMSS53000 940 LATLRPYIDWTPFFMTWSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIEVYSDESRTQVAHVLYNLRQQ 1034
789******************************************************************************************** PP
Met_synt_B12 97 aekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneeli 191
+ek+ + +n+cl+D+vapkesg++D+iG+Favt g+g ++la++++a+ ddY+ai+++a+adrLaeAfae+lhekvrke+Wgya+de+lsn++li
VIMSS53000 1035 TEKP-KGANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLI 1128
*997.5599************************************************************************************** PP
Met_synt_B12 192 kekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273
+e+YqgiRpApGYpacp+htek+tl+++l++ee+ig++Lt s+am+P asvsG+yf+hp++ryFav++i+ dq+++ya+rkg
VIMSS53000 1129 RERYQGIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQPDQLHSYAERKG 1210
********************************************************************************97 PP
Or compare VIMSS53000 to CDD or PaperBLAST