VIMSS5386 has 337 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-80 254.8 0.0 2.6e-80 254.5 0.0 1.1 1 VIMSS5386
Domain annotation for each sequence (and alignments):
>> VIMSS5386
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 254.5 0.0 2.6e-80 2.6e-80 1 187 [. 153 336 .. 153 337 .] 0.97
Alignments for each domain:
== domain 1 score: 254.5 bits; conditional E-value: 2.6e-80
HHHHHHHHHHCTTSSSHHHHCCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT----EEEEEEEEEEE-GGGHHHHHH CS
DUF1297 1 dfkekleellekglieeedlkkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelelepsyvvvGnipvvlREsllekvfe 100
df++k+e++l g+ ++edlk+++i+eyv+G++++ +yFys+l++e+el++idrRyesn+d + r+p+k+qlelel+++y+v+Gnip+vlREsll +v+e
VIMSS5386 153 DFWTKVEKFL--GIKDKEDLKNVQIQEYVIGVPVYPHYFYSKLTRELELMSIDRRYESNVDAIGRIPSKDQLELELDITYTVIGNIPLVLRESLLMDVIE 250
6778888887..7889************************************************************************************ PP
HHHHHHHHHHHHSTT---EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCE CS
DUF1297 101 lgekfveaakklvppGiiGpfcLqsvvtedlelvvfevsaRivggtnvymegspyskllfgepmsmGrriarEikeaiekdrleevv 187
+ge+ v+aa++l+ G++GpfcL+ v+t+dl++vvfe+saRiv+gtn +++gspy++l ++epms+GrriarEi+ aie+d+l+evv
VIMSS5386 251 AGERTVKAAEELMG-GLWGPFCLEGVFTPDLDFVVFEISARIVAGTNPFINGSPYTWLKYDEPMSTGRRIAREIRLAIEEDKLDEVV 336
**********9987.***********************************************************************9 PP
Or compare VIMSS5386 to CDD or PaperBLAST