VIMSS5419985 has 1180 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-42 130.4 0.4 7.4e-42 129.7 0.4 1.3 1 VIMSS5419985
Domain annotation for each sequence (and alignments):
>> VIMSS5419985
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.7 0.4 7.4e-42 7.4e-42 3 257 .. 928 1180 .] 922 1180 .] 0.84
Alignments for each domain:
== domain 1 score: 129.7 bits; conditional E-value: 7.4e-42
Met_synt_B12 3 eelveyidWtpff.qawelkgkypkiledekvgeeakklfkdAqa.mL....kkiieekllkakavvglfpansvgddievyadesrseelatlh 91
ee+ +d + f w+++ + +e+ +ee ++ ++d + +L +k i+ek l+ ++g fp++s+g+ +++y+ ++ +e++ +
VIMSS5419985 928 EEIFWHLDLQALFvGQWQFRKT------KEQSKEEYDQFIQDTVHpLLeqwkQKAIAEKILDPTVIYGYFPCQSEGNTLIIYDPDEYVSEQTLSE 1016
4444444444333134555544......45555555666666543145111145678899**********************9888888888889 PP
Met_synt_B12 92 tLrqqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsa.ilvkalaDrLaeAfaellhekvrkelWgyakdekl 185
+ r + ++++ + lc+aDf a +esgv D++ + avt+g ++e+a+++ a+ D+Y++ + + +a aeA+ae+ h+++r+e g+ e
VIMSS5419985 1017 VARFEFPRQKSGKRLCIADFFASTESGVLDVFPMQAVTVGEVATEYARKLFAA-DEYTDyLYYHGIAVQTAEALAEWCHARIRRE-LGFGDAEPD 1109
9999999999999***********************************99999.88887255789*******************9.69******* PP
Met_synt_B12 186 sneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFav 257
++++++k++YqG R+++GYpacp+ + t +ll++++ ig+ + es ++P++s s+++ hp +kyF+v
VIMSS5419985 1110 NIKDMLKQRYQGSRYSFGYPACPNILDQYTQLDLLKTDR-IGMYMDESEQIYPEQSTSAIITYHPVAKYFNV 1180
*************************************99.******************************97 PP
Or compare VIMSS5419985 to CDD or PaperBLAST