VIMSS5419985 has 1180 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-42 131.7 0.3 3e-42 131.0 0.3 1.3 1 VIMSS5419985
Domain annotation for each sequence (and alignments):
>> VIMSS5419985
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 131.0 0.3 3e-42 3e-42 2 257 .. 927 1180 .] 923 1180 .] 0.85
Alignments for each domain:
== domain 1 score: 131.0 bits; conditional E-value: 3e-42
Met_synt_B12 2 leelveyidWtpff.qaWelkgkypkiledekvgeeakklfkdAqa.mL....kkiieekllkakavvglfpAnsegddievyadesrseelatl 90
lee+ +d + f W+++++ +e+ +ee ++ ++d + +L +k i+ek l+ ++g fp++seg+ +++y+ ++ +e++
VIMSS5419985 927 LEEIFWHLDLQALFvGQWQFRKT------KEQSKEEYDQFIQDTVHpLLeqwkQKAIAEKILDPTVIYGYFPCQSEGNTLIIYDPDEYVSEQTLS 1015
45555555555444145666655......44455555555555533145111145678899**********************888877777888 PP
Met_synt_B12 91 htLrqqaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakdek 184
++ r + ++++ + lc+aDf a++esgv D++ + avt+g + e+a+++ a+ d+Y++ + + +a + aeA+ae+ h+++r+e g+ e
VIMSS5419985 1016 EVARFEFPRQKSGKRLCIADFFASTESGVLDVFPMQAVTVGEVATEYARKLFAA-DEYTDyLYYHGIAVQTAEALAEWCHARIRRE-LGFGDAEP 1108
88999999999999************************************9999.88887255789*******************9.69****** PP
Met_synt_B12 185 lsneelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFav 257
++++++k++Yqg R+++GYpacp+ + t +ll++++ ig+ + es ++P++s s+++ hp a+yF+v
VIMSS5419985 1109 DNIKDMLKQRYQGSRYSFGYPACPNILDQYTQLDLLKTDR-IGMYMDESEQIYPEQSTSAIITYHPVAKYFNV 1180
**************************************99.******************************97 PP
Or compare VIMSS5419985 to CDD or PaperBLAST