VIMSS5430106 has 215 amino acids
Query: DUF3318 [M=141]
Accession: PF11780.13
Description: Protein of unknown function (DUF3318)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-53 164.7 0.1 5.9e-53 164.7 0.1 1.4 2 VIMSS5430106
Domain annotation for each sequence (and alignments):
>> VIMSS5430106
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 164.7 0.1 5.9e-53 5.9e-53 1 141 [] 16 158 .. 16 158 .. 0.99
2 ? -3.5 0.1 0.46 0.46 119 135 .. 180 196 .. 177 199 .. 0.78
Alignments for each domain:
== domain 1 score: 164.7 bits; conditional E-value: 5.9e-53
DUF3318 1 rrLldllpaslRmevkiv.akpeqseviqaefelpweverpiyinfdlWekLskdqrdllllrevawlqnakwfkpdlyqavllagllglvvelvqq 96
rrL++llp++l+++v+++ +++ ++++i++e+ +++ev +i+i++ +We+L+ dqr+ll+++eva++qn++++++++++a+l++gl+g+v+el++q
VIMSS5430106 16 RRLKTLLPPELQNWVMVEgSTEINPPLIRCEELGRDEV--EIQIDLAKWENLAIDQRNLLFWHEVARIQNDTIPREGWEMAALAIGLGGAVGELWVQ 110
7************************************9..9******************************************************** PP
DUF3318 97 Davgvllagglaaiaalqiwrknrsqkv...eieAdeaAikvaqrrGY 141
D++++lla+ l++i+++++w+kn+++++ +ieAde+Ai++a+r+GY
VIMSS5430106 111 DGLLLLLALSLCGISGYRLWQKNNGERKlkeSIEADEKAIALATRFGY 158
**************************99999****************9 PP
== domain 2 score: -3.5 bits; conditional E-value: 0.46
DUF3318 119 nrsqkveieAdeaAikv 135
nr+q+++ e++ +A+++
VIMSS5430106 180 NRRQRKQYESRLQALRR 196
78888899998888876 PP
Or compare VIMSS5430106 to CDD or PaperBLAST