VIMSS544202 has 591 amino acids
Query: CM_2 [M=79]
Accession: PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-14 40.3 7.7 1.8e-14 40.2 5.4 2.4 2 VIMSS544202
Domain annotation for each sequence (and alignments):
>> VIMSS544202
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.2 5.4 1.8e-14 1.8e-14 1 78 [. 244 321 .. 244 322 .. 0.98
2 ? -2.2 0.0 0.31 0.31 7 30 .. 557 580 .. 555 586 .. 0.76
Alignments for each domain:
== domain 1 score: 40.2 bits; conditional E-value: 1.8e-14
CM_2 1 RkeIdeiDrelleLlaeRmelakeiaeyKkenglpvldpeReeevlerlregaeelgldpeavekifreiisesralQ 78
Rk+I iD+ +l+L++ R +lak+i e+K+ ++lp+ d++ e e+ + l e a+e++l+p ++ ++++ +is+ ++++
VIMSS544202 244 RKQIMVIDKLILDLIKIRNDLAKQIKEIKELRNLPIEDKKWEIEKRNILLEFAKERELNPLYTDQLIELLISWAKHIE 321
9************************************************************************99987 PP
== domain 2 score: -2.2 bits; conditional E-value: 0.31
CM_2 7 iDrelleLlaeRmelakeiaeyKk 30
+++++le + ++ +k +++++
VIMSS544202 557 LNNKILEEIRAKANWVKHLGNFRE 580
788899999999999998888875 PP
Or compare VIMSS544202 to CDD or PaperBLAST