VIMSS544440 has 295 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-31 95.2 0.0 1.4e-30 92.6 0.0 2.0 1 VIMSS544440
Domain annotation for each sequence (and alignments):
>> VIMSS544440
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 92.6 0.0 1.4e-30 1.4e-30 2 153 .. 123 243 .. 122 256 .. 0.92
Alignments for each domain:
== domain 1 score: 92.6 bits; conditional E-value: 1.4e-30
UPF0020 2 gyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaeka 99
+ +++++p+++ +tLA +l++l+g+k+g +++DP+CG G+ilIEaal+g ++ gsD+d++++++a++N+ ++
VIMSS544440 123 HNKPCFHPSSIIPTLAKVLINLTGLKEG-TIYDPFCGIGGILIEAALMGFQVK--------------------------GSDIDEKMLECAKQNLLYY 193
6789*********************987.7***********************..........................******************* PP
UPF0020 100 gvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelk 153
g++++ +++ da++L +g d+ivt+pPYG+ + +++ +LY+ fl+++
VIMSS544440 194 GIKEFELAKC-DARDLC-LDG--DAIVTDPPYGRYSKVYGNILELYKGFLSKAI 243
**99877776.******.665..99************************98764 PP
Or compare VIMSS544440 to CDD or PaperBLAST