VIMSS5512517 has 612 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-251 820.2 1.9 4.4e-251 820.0 1.9 1.0 1 VIMSS5512517
Domain annotation for each sequence (and alignments):
>> VIMSS5512517
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 820.0 1.9 4.4e-251 4.4e-251 2 542 .. 18 606 .. 17 607 .. 0.98
Alignments for each domain:
== domain 1 score: 820.0 bits; conditional E-value: 4.4e-251
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++atG++d d++kPiia++ns+t++vPghvhlkdl++lv++eie+ Ggvakef+tiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++D
VIMSS5512517 18 ARALWRATGMQDGDFQKPIIAIANSFTQFVPGHVHLKDLGQLVAREIERVGGVAKEFDTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCAD 114
79*********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
alv+is+CDki+PGmlmaalrlniP+++vsGGpmeagkt+l+e +++d+++a++ +a++ s+e++ e+ersacPt+gsCsG+ftansm+clteal
VIMSS5512517 115 ALVCISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGKTALAE--HKLDLIDAMVIAADDSASDEKVAEFERSACPTCGSCSGMFTANSMNCLTEAL 209
****************************************865..689************************************************* PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
GlslPg++t+ at+a++++l+ ++g+ vel+++ + Pr i+t eafena+tld+a+GGstnt+Lhlla+a+e +v + ++d+drls++v
VIMSS5512517 210 GLSLPGNGTVVATHADREQLFLRAGRVAVELCHRWYGgedptalPRGIATFEAFENAMTLDIAMGGSTNTILHLLAAAQEGEVPFGMQDIDRLSKRV 306
**********************************9999999999***************************************************** PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vd 346
P+l+k++P++ k+ ied+hraGG++a+l+el + gllh+ a tv +tla+ +++ +v++
VIMSS5512517 307 PQLCKVAPNTPKYhIEDVHRAGGIMAILGELARGGLLHTTAATVHARTLADAIAHWDVTQtvdenvhtfykagpagiptqiafsqatrwdsldtdR- 402
**********9998********************************************999******************************77444. PP
TIGR00110 347 qd..virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalv 441
+ +ir + +++++egglavL+Gn+a +G+vvk+agv+e+i +feG+a+vfes+++a+++il+ +vk+GdvvviryeGPkGgPGm+emL+Pts+l+
VIMSS5512517 403 -SegCIRDVAHALSQEGGLAVLYGNIARDGCVVKTAGVDESIHVFEGTARVFESQDAAVKSILADEVKAGDVVVIRYEGPKGGPGMQEMLYPTSYLK 498
.256********************************************************************************************* PP
TIGR00110 442 glGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyakl 531
+ GLgk++aL+tDGrfsGgt+GlsiGh sPeaa+gGai+lv+dGDki iDi+nr ++l +s+e la+rra++++k++ r+v aL++ya l
VIMSS5512517 499 SKGLGKQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDKILIDIPNRGINLLISDEALASRRAEQDAKGWkpvevrpRKVTTALKAYALL 595
*****************************************************************************9****9999*********** PP
TIGR00110 532 vssadkGavld 542
++sadkGav+d
VIMSS5512517 596 ATSADKGAVRD 606
*********98 PP
Or compare VIMSS5512517 to CDD or PaperBLAST