VIMSS566124 has 559 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-240 784.5 11.6 2.9e-240 784.3 11.6 1.0 1 VIMSS566124
Domain annotation for each sequence (and alignments):
>> VIMSS566124
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 784.3 11.6 2.9e-240 2.9e-240 1 542 [. 17 556 .. 17 557 .. 0.99
Alignments for each domain:
== domain 1 score: 784.3 bits; conditional E-value: 2.9e-240
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++r++l+a+G++ded++kPii+v+n++++i+P+++ l++la +++e+i++aGg+++ f+ti+vsDGi+mg+eGmkysL+sre+iaDs+et ++a+ +D
VIMSS566124 17 PNRSMLRAVGFSDEDFTKPIIGVANGFSTITPCNMGLNKLALKAEESIREAGGMPQMFGTITVSDGISMGTEGMKYSLVSREVIADSIETACNAQSMD 114
68************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
++++i+ CDk++PG+++a +r+niP+i+++GG++++gk++ +e++++v++feavg+ ++gk++e++l e+e+++ P+agsC+G+ftan+m+++ e+lG
VIMSS566124 115 GVLAIGGCDKNMPGAMIAIARMNIPSIFIYGGTIKPGKLN-GEDLTVVSAFEAVGQLTSGKINEKRLIEVEKNCIPGAGSCGGMFTANTMSAVIEVLG 211
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
lslP+sst++a + ek+ +a+ks++ +v++++k+i+P +++tke+fenait+++a+GGstn+vLh+laia++ag+++++ddf+r+++kvP++++lkPs
VIMSS566124 212 LSLPYSSTMAAEDYEKEVSAEKSAEILVDAIRKDIRPLTLMTKESFENAITVIMAIGGSTNAVLHILAIANTAGIDINIDDFERIRQKVPVICDLKPS 309
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr.vdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeG 391
gk+v++dlh+aGG+++v+k l + gl+h ++ ++ Gkt+ e l++++v++ ++qdvir +dnp++k+g+la+LkGnla eG+v+ki+g+++ + +G
VIMSS566124 310 GKYVTVDLHKAGGIPQVMKILLNTGLIHGNCRNIEGKTVVESLKDIPVKPpENQDVIRDIDNPLYKKGHLAILKGNLASEGCVAKISGIKN--PVLKG 405
***********************************************99748899************************************..8899* PP
TIGR00110 392 pakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkik 489
pa++fesee++l++il+ ++k+G+vvvir eGP GgPGmremLaPtsa+vg GLg+kvaLitDGrfsGgt+Gl++Gh++Peaa+gG+ial+++GD i+
VIMSS566124 406 PARIFESEEDCLKSILNNDIKAGNVVVIRNEGPVGGPGMREMLAPTSAIVGQGLGEKVALITDGRFSGGTYGLVVGHIAPEAAVGGNIALIKEGDLIT 503
************************************************************************************************** PP
TIGR00110 490 iDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
+D++n+ +++e+s+eel+ rr +++k++++++kg+L+ky+++vs+++ Gav+d
VIMSS566124 504 VDATNQLIEVELSDEELEMRRINWEKPSKKYKKGVLSKYSRIVSTSSLGAVTD 556
***************************************************87 PP
Or compare VIMSS566124 to CDD or PaperBLAST