VIMSS566230 has 1186 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-36 111.1 0.0 5.4e-36 110.5 0.0 1.3 1 VIMSS566230
Domain annotation for each sequence (and alignments):
>> VIMSS566230
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.5 0.0 5.4e-36 5.4e-36 3 256 .. 939 1185 .. 937 1186 .] 0.86
Alignments for each domain:
== domain 1 score: 110.5 bits; conditional E-value: 5.4e-36
Met_synt_B12 3 eelveyidWtpffq.aWelkgkypkiledekvgeeakklfkdAqamLkkii....eekllkakavvglfpAnsegddievyadesrseelatlht 92
++l+ y+d + f+ W++k++ + ++v+e + l + A+ +L+k+i ++ l++ k v+g f++ ++++ i ++ d+ +++++ ++++
VIMSS566230 939 DKLIFYLDKKALFSgQWQIKKN-----KGQSVEEYNNYLDSYANPLLEKWIniilDKGLISPKVVYGYFRCGRNDNSIYLF-DNVSNKRISEFNF 1027
5677777777666536888877.....566677777778888888888765222268999********************8.666778899**** PP
Met_synt_B12 93 LrqqaekeegkpnlclaDfvapke.sgvkDyiGlFavtaglgieelakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakdekl 185
rq++ +nlc+aDf + + ++ D + + avt+g ++e+ +e+ ++ d+Ys+ ++ + l+ +LaeA+ae++h+ vr e g+++ e
VIMSS566230 1028 PRQKS-----GNNLCIADFYCDLKnNDPVDIFPMQAVTMGEIASEYSQELFKA-DKYSDyLIFHGLTVQLAEALAEYVHSIVRIE-CGFKSYEPN 1115
**994.....569*****98775505558999999****99999999999888.99986377899******************98.8******** PP
Met_synt_B12 186 sneelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFa 256
+n++++++kY+g R+++GYpacp+ + ++ +lld+++ i++++ es ++P++s +++ h +a+yF+
VIMSS566230 1116 NNRDILAQKYRGARYSFGYPACPKVSDSNIQLSLLDTKR-INLTMDESEQLHPEQSTTAIISLHSKAKYFS 1185
*************************************99.******************************7 PP
Or compare VIMSS566230 to CDD or PaperBLAST