VIMSS567838 has 1214 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-34 106.3 0.0 1.5e-34 105.7 0.0 1.3 1 VIMSS567838
Domain annotation for each sequence (and alignments):
>> VIMSS567838
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 105.7 0.0 1.5e-34 1.5e-34 2 256 .. 966 1213 .. 965 1214 .] 0.88
Alignments for each domain:
== domain 1 score: 105.7 bits; conditional E-value: 1.5e-34
Met_synt_B12 2 leelveyidWtpffq.awelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrq 95
l+e+++y+d + f+ w+++ + ++ +++ + +++ q+ L++i +e+ll+ ++g fp+ ++++d+ v+++e ++ l ++++ rq
VIMSS567838 966 LDEIIQYLDRNALFSgQWQIRKRKDQ-SREQYDQYINDEIEPILQHWLHRIRNESLLHPGVAYGYFPCGRRDNDLLVFNSEG-QSLLGKFNLPRQ 1058
899******99888648***999433.3334444455556666689999****************************95555.556788888887 PP
Met_synt_B12 96 qaekeegepnlclaDfvapkesgv.kDyiGlfavtaglgieelakefeaeeDdYsa.ilvkalaDrLaeAfaellhekvrkelWgyakdeklsne 188
+ g + +c+aDf ++ e g kD + + avt+g +++ +a+++ ++ D Y++ + ++ la LaeA+ae+ h+ +r e g+++de + +
VIMSS567838 1059 K-----GGNRYCIADFYRDLEGGLpKDILPMQAVTMGENASIFAQKLFES-DAYTDyLFFHGLAVQLAEALAEWTHSLIRCE-CGFKSDEPKTLQ 1146
7.....6779**********999879***************999998887.99986266899******************99.8*********** PP
Met_synt_B12 189 elikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFa 256
++++++Y+G R ++GYpacp+ +++ ++l+a+ ig+++ + ++P++s +l+ h +++yF+
VIMSS567838 1147 DVLAQRYRGSRFSFGYPACPNVGDSRQQLNWLKADL-IGLTMDPNDQLHPEQSTTALVTLHSKARYFS 1213
***********************************9.******************************7 PP
Or compare VIMSS567838 to CDD or PaperBLAST