VIMSS567838 has 1214 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-35 108.0 0.0 4.4e-35 107.5 0.0 1.3 1 VIMSS567838
Domain annotation for each sequence (and alignments):
>> VIMSS567838
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.5 0.0 4.4e-35 4.4e-35 2 256 .. 966 1213 .. 965 1214 .] 0.89
Alignments for each domain:
== domain 1 score: 107.5 bits; conditional E-value: 4.4e-35
Met_synt_B12 2 leelveyidWtpffq.aWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrq 95
l+e+++y+d + f+ W+++++ + +++ + +++ q+ L++i +e+ll+ ++g fp+ ++++d+ v+++e ++ l ++++ rq
VIMSS567838 966 LDEIIQYLDRNALFSgQWQIRKRK-DQSREQYDQYINDEIEPILQHWLHRIRNESLLHPGVAYGYFPCGRRDNDLLVFNSEG-QSLLGKFNLPRQ 1058
899******99888648****994.3344444445555566666899******************************95555.556788888888 PP
Met_synt_B12 96 qaekeegkpnlclaDfvapkesgv.kDyiGlFavtaglgieelakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakdeklsne 188
+ g + +c+aDf ++ e g kD + + avt+g +++ +a+++ ++ d Y++ + + la +LaeA+ae+ h+ +r e g+++de + +
VIMSS567838 1059 K-----GGNRYCIADFYRDLEGGLpKDILPMQAVTMGENASIFAQKLFES-DAYTDyLFFHGLAVQLAEALAEWTHSLIRCE-CGFKSDEPKTLQ 1146
7.....5678***********99879**************9999999887.89976266899******************98.8*********** PP
Met_synt_B12 189 elikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFa 256
++++++Y+g R ++GYpacp+ +++ + l+a+ ig+++ + ++P++s +l+ h +aryF+
VIMSS567838 1147 DVLAQRYRGSRFSFGYPACPNVGDSRQQLNWLKADL-IGLTMDPNDQLHPEQSTTALVTLHSKARYFS 1213
***********************************9.******************************7 PP
Or compare VIMSS567838 to CDD or PaperBLAST