VIMSS56804 has 612 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-256 835.4 0.8 1.1e-255 835.2 0.8 1.0 1 VIMSS56804
Domain annotation for each sequence (and alignments):
>> VIMSS56804
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 835.2 0.8 1.1e-255 1.1e-255 2 542 .. 18 606 .. 17 607 .. 0.98
Alignments for each domain:
== domain 1 score: 835.2 bits; conditional E-value: 1.1e-255
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
aral++atG+kded++kPiia++ns+t++vPghvhlkdl++lv++eie+aGgvakefntiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++Da+
VIMSS56804 18 ARALWRATGMKDEDFKKPIIAIANSFTQFVPGHVHLKDLGQLVAREIEKAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADAI 116
79************************************************************************************************* PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlsl 199
v+is+CDki+PGmlmaalrlniP+++vsGGpmeagktkl + +d+++a++ +a++ s+e++ e+ersacPt+gsCsG+ftansm+cltealGlsl
VIMSS56804 117 VCISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTKL--ASHGLDLVDAMVVAADDSCSDEKVAEYERSACPTCGSCSGMFTANSMNCLTEALGLSL 213
**************************************8..557899**************************************************** PP
TIGR00110 200 Pgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
Pg++++lat+a++++l+ ++g+ vel+++++ Pr+i++ +afena+tld+a+GGstnt+Lhlla+a+ea+v ++l d+drlsrkvP+l+k+
VIMSS56804 214 PGNGSTLATHADREQLFLRAGRLAVELCQRYYGegddsvlPRNIANFKAFENAMTLDIAMGGSTNTILHLLAAAQEAEVPFDLRDIDRLSRKVPQLCKV 312
********************************9999*************************************************************** PP
TIGR00110 292 kPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...............................vdqd....virsld 354
+P+ +k+ +ed+hraGG+ ++l+el + gllh+d+ tv ++a+ +++ ++++ +d+d +irs++
VIMSS56804 313 APNIQKYhMEDVHRAGGIFSILGELARGGLLHTDVPTVHSPSMADAIAQWDITQtrdeavhtffkagpagiptqtafsqntrwpsLDDDraegCIRSVE 411
****9999********************************************999******************************44444566****** PP
TIGR00110 355 npvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLit 453
++++kegglavL+Gn+a +G+vvk+agv+e+i +feG+ak+fes+++a+++ilg +vk+Gd+v+iryeGPkGgPGm+emL+Pts+l++ GLgk++aL+t
VIMSS56804 412 HAYSKEGGLAVLYGNIALDGCVVKTAGVDESIHVFEGSAKIFESQDAAVKGILGDEVKAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCALLT 510
*************************************************************************************************** PP
TIGR00110 454 DGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGavld 542
DGrfsGgt+GlsiGh sPeaa+gGai+lv+dGDk+ iDi+nr ++l vs+eela+rra+++kk++ r+v+ aL++ya l++sadkGav++
VIMSS56804 511 DGRFSGGTSGLSIGHASPEAAAGGAIGLVQDGDKVLIDIPNRSINLLVSDEELAARRAEQDKKGWkpaapraRRVSTALKAYALLATSADKGAVRN 606
*****************************************************************9****9999********************87 PP
Or compare VIMSS56804 to CDD or PaperBLAST