VIMSS577036 has 480 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-13 37.3 0.0 3.6e-13 35.7 0.0 1.9 1 VIMSS577036
Domain annotation for each sequence (and alignments):
>> VIMSS577036
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.7 0.0 3.6e-13 3.6e-13 18 144 .. 163 278 .. 159 338 .. 0.78
Alignments for each domain:
== domain 1 score: 35.7 bits; conditional E-value: 3.6e-13
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie.fsqadaak 114
a+v + + k +e+ +DP CG+G++l+ a ++ ++ + e+ ++ l+g D+ + vv+ a N+ +g + +++ d +
VIMSS577036 163 NAMVDVVQPKITETVADPACGTGGFLLSAYDYMRKQSD-----------EQSKVEFLQTKALRGNDITPLVVTLASMNLYLHDIGVDTTpIKCEDSLE 249
69************************999877777772...........223333446666******************9999996554166655555 PP
UPF0020 115 LrlkegevdvivtnpPYGerlgskkalekL 144
++e+ vdvi++npP+G r ++ ++
VIMSS577036 250 H-EPEHLVDVILANPPFGARPAGSVDISTM 278
4.5999*************97666665555 PP
Or compare VIMSS577036 to CDD or PaperBLAST