VIMSS5785427 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-268 875.9 3.1 6.1e-268 875.7 3.1 1.0 1 VIMSS5785427
Domain annotation for each sequence (and alignments):
>> VIMSS5785427
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 875.7 3.1 6.1e-268 6.1e-268 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 875.7 bits; conditional E-value: 6.1e-268
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++atG++d+d++kPiiavvns+t++vPghvhl+dl+klv+e+ieaaGgvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++D
VIMSS5785427 18 ARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCAD 114
79*********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
a+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls++++++d+++a+++ a++++s++++e+iersacPt+gsCsG+ftansm+clteal
VIMSS5785427 115 AMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQLIKLDLVDAMIQGANPNVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEAL 211
************************************************************************************************* PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
Gls+Pg+++llat+a++k+l+ ++gkrivel+k++++ Pr+i+ keafena+ ld+a+GGstntvLhlla+a+e +v+++++d+drlsr+v
VIMSS5785427 212 GLSQPGNGSLLATHADRKTLFINAGKRIVELTKRYYEqddlsalPRNIAKKEAFENAMILDIAMGGSTNTVLHLLAAAQEGDVDFKMEDIDRLSRQV 308
************************************************************************************************* PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vd 346
P+l+k++Ps++k+ +ed+hraGGv+++l+eld++gll++++ +++G +l etl++++v+ +
VIMSS5785427 309 PHLCKVAPSTQKYhMEDVHRAGGVMGILGELDRAGLLNRNVNNILGLSLPETLAQYDVMLsqdeqvksmyqagpagirttkafsqdcrwptldtdRE 405
************99*********************************************99******************************886666 PP
TIGR00110 347 qdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvgl 443
q +irs+ ++++++gglavL Gnla++G++vk+agv+ed l+f Gpakv+es+++a+eailggkv +Gdvv+iryeGPkGgPGm+emL+Pts+l+++
VIMSS5785427 406 QGCIRSKAHAYSQDGGLAVLSGNLAQDGCIVKTAGVDEDNLVFSGPAKVYESQDDAVEAILGGKVVAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSM 502
66*********************************************************************************************** PP
TIGR00110 444 GLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyakl 531
GLgk++aLitDGrfsGgt+GlsiGhvsPeaa+gG i+lve+GD++ i+i+nr+++l+v+e+ la+rr+++ ++++ r+v++aL++ya+l
VIMSS5785427 503 GLGKACALITDGRFSGGTSGLSIGHVSPEAANGGIIGLVEEGDIVDINIPNREINLRVDEKTLAARREAQLARGDkawtpkdrqRQVSFALRAYASL 599
**********************************************************************999989999***99************* PP
TIGR00110 532 vssadkGavld 542
++sadkGav+d
VIMSS5785427 600 ATSADKGAVRD 610
*********98 PP
Or compare VIMSS5785427 to CDD or PaperBLAST