VIMSS588717 has 609 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.9e-258 842.1 5.4 1e-257 841.9 5.4 1.0 1 VIMSS588717
Domain annotation for each sequence (and alignments):
>> VIMSS588717
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 841.9 5.4 1e-257 1e-257 2 541 .. 18 607 .. 17 609 .] 0.99
Alignments for each domain:
== domain 1 score: 841.9 bits; conditional E-value: 1e-257
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
ar l++atG+kded++kPiiavvns+t++vPghvhlkdl+++v+e+i+aaGgvakefntiav+DGiamgh+Gm+ysLpsr++iaDsve++v+ah++Da
VIMSS588717 18 ARGLWRATGMKDEDFGKPIIAVVNSFTQFVPGHVHLKDLGQMVAEQIQAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDLIADSVEYMVNAHCADA 115
689*********************************************************************************************** PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGmlmaa+rlniP+++vsGGpmeagk+k+ + + +d+++a++ +a++ ++ee++++ersacPt+gsCsG+ftansm+cltealGl
VIMSS588717 116 MVCISNCDKITPGMLMAAMRLNIPVVFVSGGPMEAGKVKFRGNEKAIDLVDAMVVAADDSYTDEEVQAFERSACPTCGSCSGMFTANSMNCLTEALGL 213
****************************************99******************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
slPg++++ at+a++k+l+ k+g+ iv l k++++ Pr+i+tk+a+ena+tld+a+GGstntvLhlla+a+ea+v++++dd+drlsr+vP+l
VIMSS588717 214 SLPGNGSIVATHANRKKLFLKAGELIVSLAKRYYEqddssilPRSIATKAAYENAMTLDIAMGGSTNTVLHLLAAASEAEVDFTMDDIDRLSRNVPVL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvi 350
+k++P+ + v +ed+hraGG++++l+eld+++ll++ + tv ktl++ l+k +++r ++ vi
VIMSS588717 312 CKVAPAKQDVhMEDVHRAGGIMSILGELDRAKLLNTTVSTVHEKTLQDALNKWDIIRtedadvyeffrsspggvptqvafsqnryystldgdRENGVI 409
*******9999*****************************************************************************98766677** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
r+ +++++k+gglavL+Gn+a eG++vk+agv+e+ilkf+G+a+vfes+++a+eailg ++k+GdvvviryeGP+GgPGm+emL+Pts+l++ GLgk+
VIMSS588717 410 RNAEHAFSKDGGLAVLYGNIALEGCIVKTAGVDESILKFNGTARVFESQDAAVEAILGNEIKAGDVVVIRYEGPRGGPGMQEMLYPTSYLKSKGLGKD 507
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGa 539
+aLitDGrfsGg++GlsiGh+sPeaaegGai+lvedGD i+iDi+nr ++l+v++e la+rr+++++k++ r+v+ aL+ ya +sa kGa
VIMSS588717 508 CALITDGRFSGGSSGLSIGHISPEAAEGGAIGLVEDGDLIEIDIPNRSMNLKVDDETLAARRKAQDEKGWkpveerkRKVSKALKVYAMHTTSAAKGA 605
*********************************************************************999***9999******************* PP
TIGR00110 540 vl 541
v+
VIMSS588717 606 VR 607
97 PP
Or compare VIMSS588717 to CDD or PaperBLAST