VIMSS5915617 has 266 amino acids
Query: LiaF-like_C [M=114]
Accession: PF09922.13
Description: Cell wall-active antibiotics response LiaF, C-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-12 33.1 0.0 4.4e-12 32.2 0.0 1.5 1 VIMSS5915617
Domain annotation for each sequence (and alignments):
>> VIMSS5915617
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.2 0.0 4.4e-12 4.4e-12 12 114 .] 164 260 .. 154 260 .. 0.78
Alignments for each domain:
== domain 1 score: 32.2 bits; conditional E-value: 4.4e-12
LiaF-like_C 12 yeledini.qrviGdttiDLskavlpkgetvivirkliGdvkilVPedvevsveasvifGsvtvldekeagllnesvkleseeyeeaerkvkiivsl 107
+++ ++++ ++++G +iDL+ a+l+++ i ++G ++i+VPe+v v ++ ifG + +k + ln +++ +v+i +
VIMSS5915617 164 WHVPNVHTsFAMMGGNQIDLRDAFLESDRIQINAYTFMGGIEIIVPEGVFVICDGMGIFGGFEQSVDKAGA-LNP------ARLPSNAPTVHIKGLA 253
5555554415799************************************************9944444433.444......4556666778888888 PP
LiaF-like_C 108 liGdveV 114
++G v V
VIMSS5915617 254 FMGGVSV 260
8887766 PP
Or compare VIMSS5915617 to CDD or PaperBLAST