VIMSS5915850 has 811 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.5e-41 127.0 2.2 7.7e-41 126.5 0.6 2.1 2 VIMSS5915850
Domain annotation for each sequence (and alignments):
>> VIMSS5915850
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 126.5 0.6 7.7e-41 7.7e-41 2 198 .. 9 221 .. 8 222 .. 0.76
2 ? -3.8 0.0 0.62 0.62 96 116 .. 267 287 .. 246 305 .. 0.58
Alignments for each domain:
== domain 1 score: 126.5 bits; conditional E-value: 7.7e-41
DUF262 2 edllskkksgfliPdyQRgyvWdeeqvedLiedike.....lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka................ 77
+++++k++ ++iP yQR+y W+e+q+++L++d+ e +r++++G++v + +++ ++ viDGQQRltT++l++ a
VIMSS5915850 9 TKVYDGKHRTLEIPVYQRNYDWTEKQCSRLFDDLSEvvkenHRQHFFGAVVG---KPQGSWTWVVIDGQQRLTTISLFMLAlvhslraseveegefn 102
67788888889***********************99****************...7777**********************8888777776666666 PP
DUF262 78 .........leed.....ekekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek....... 153
l ++ +e + k+kl++ + d++ ++kl+ e+e e+ +nl +y+++++
VIMSS5915850 103 agynidlatL--IeddylRSGNEGNLKFKLKPVKNDNEAYQKLFGPESEFIES------------------------SNLTANYRYFRNVlkatdlt 173
6655554442..02235566677777777777777777777777777765444........................33333333333333333333 PP
DUF262 154 ......aieklklveielddeddedeafeiFerlNsrGvpLsaadllkall 198
aiekl+++++ l+++dd ++iFe+lNs+G++Ls ad++++l+
VIMSS5915850 174 aaqlweAIEKLRVMYLDLEEFDD---PQRIFESLNSTGLELSEADKVRNLV 221
43355555889999999999999...**********************986 PP
== domain 2 score: -3.8 bits; conditional E-value: 0.62
DUF262 96 reedkdffekllenekeelek 116
+++ + f+k+++n+k e
VIMSS5915850 267 KQDVYEEFKKFIRNSKLPVEF 287
334455566666665555544 PP
Or compare VIMSS5915850 to CDD or PaperBLAST