VIMSS5916638 has 1196 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-34 105.8 0.0 2.6e-34 104.9 0.0 1.4 1 VIMSS5916638
Domain annotation for each sequence (and alignments):
>> VIMSS5916638
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 104.9 0.0 2.6e-34 2.6e-34 48 257 .. 982 1196 .] 978 1196 .] 0.83
Alignments for each domain:
== domain 1 score: 104.9 bits; conditional E-value: 2.6e-34
Met_synt_B12 48 Lkkiieekll.kakavvglfpAnsegddievyades.rseelatlhtLrqqaekeegkpnlclaDfvapkesgvkD....yiGlFavtaglgiee 136
L+++++e l ++ v+g fpA +egdd+++ ++ + +++e +++ + rqq+ lc+aDf++p+e+ vkD ++ + vt+g i +
VIMSS5916638 982 LDRLKSEGILdHVALVYGYFPAVAEGDDVVILESPDpHAAERMRFSFPRQQRG-----RFLCIADFIRPREQAVKDgqvdVMPFQLVTMGNPIAD 1071
67777777662456799************998665546678899999999954.....59*********98755443332999999********* PP
Met_synt_B12 137 lakefeaekddYsailvkaladrLaeAfaellhekvrkelW....gyakd.eklsneelikekYqgiRpApGYpacpdhtekktlfelldaeeki 226
+a+e+ a+++ + + v+ + +L+eA+ae+ h++vr el g +d + ++++ ++ +Y+g R ++GY +cpd + +++l+ell+ + i
VIMSS5916638 1072 FANELFAANEYREYLEVHGIGVQLTEALAEYWHSRVRSELKlndgGSVADfDPEDKTKFFDLDYRGARFSFGYGSCPDLEDRAKLVELLEPGR-I 1165
****999955555567999*******************975222222222133455678999*****************************99.* PP
Met_synt_B12 227 gieLteslamtPaasvsGlyfahpearyFav 257
g+eL+e+l ++P++s ++++ hpea+yF+v
VIMSS5916638 1166 GVELSEELQLHPEQSTDAFVLYHPEAKYFNV 1196
*****************************97 PP
Or compare VIMSS5916638 to CDD or PaperBLAST