VIMSS5916638 has 1196 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-34 104.6 0.0 6.2e-34 103.7 0.0 1.4 1 VIMSS5916638
Domain annotation for each sequence (and alignments):
>> VIMSS5916638
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 103.7 0.0 6.2e-34 6.2e-34 48 257 .. 982 1196 .] 978 1196 .] 0.83
Alignments for each domain:
== domain 1 score: 103.7 bits; conditional E-value: 6.2e-34
Met_synt_B12 48 Lkkiieekllk.akavvglfpansvgddievyades.rseelatlhtLrqqaekeegepnlclaDfvapkesgvkD....yiGlfavtaglgiee 136
L+++ +e l+ + v+g fpa ++gdd+++ ++ + +++e +++ + rqq lc+aDf++p+e+ vkD ++ + vt+g i +
VIMSS5916638 982 LDRLKSEGILDhVALVYGYFPAVAEGDDVVILESPDpHAAERMRFSFPRQQR-----GRFLCIADFIRPREQAVKDgqvdVMPFQLVTMGNPIAD 1071
67777777665156699************99866554667889999999994.....469*********98766543333899999********* PP
Met_synt_B12 137 lakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelW....gyakd.eklsneelikekYqGiRpApGYpacpdhsekktlfelldaeeki 226
+a+e+ a+++ + + v+ + L+eA+ae+ h++vr el g +d + ++++ ++ +Y+G R ++GY +cpd + +++l+ell+ + i
VIMSS5916638 1072 FANELFAANEYREYLEVHGIGVQLTEALAEYWHSRVRSELKlndgGSVADfDPEDKTKFFDLDYRGARFSFGYGSCPDLEDRAKLVELLEPGR-I 1165
****99995555567799********************975222222222133455779999*****************************99.* PP
Met_synt_B12 227 gieLteslamtPaasvsGlyfahpeskyFav 257
g+eL+e+l ++P++s ++++ hpe+kyF+v
VIMSS5916638 1166 GVELSEELQLHPEQSTDAFVLYHPEAKYFNV 1196
*****************************97 PP
Or compare VIMSS5916638 to CDD or PaperBLAST